Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03412 and BL02222

See DNA alignment / Visit BSNT_03412 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:22
# Commandline: needle
#    -asequence pep-align/BSNT_03412___sleB.1.5803.seq
#    -bsequence pep-align/BL02222___sleB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03412___sleB-BL02222___sleB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03412___sleB-BL02222___sleB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03412___sleB
# 2: BL02222___sleB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     228/322 (70.8%)
# Similarity:   259/322 (80.4%)
# Gaps:          18/322 ( 5.6%)
# Score: 1168.0
# 
#
#=======================================

BSNT_03412___      1 MKSKGSIMACLILFSFTITTF---FNTETISAFSNQVIQRGATGDDVVEL     47
                     ||||||....:||.:...|:.   |:.:: :|||.||||||||||||:||
BL02222___sle      1 MKSKGSFCLNVILCTIMATSLSLPFSQKS-AAFSEQVIQRGATGDDVIEL     49

BSNT_03412___     48 QARLQYNGYYNGKIDGVYGWGTYWAVRNFQDQFGLKEVDGLVGAKTKQTL     97
                     ||||||||||||:|||||||.|||||||||:||||::.|||||.|||:.|
BL02222___sle     50 QARLQYNGYYNGRIDGVYGWATYWAVRNFQNQFGLRDTDGLVGPKTKRLL     99

BSNT_03412___     98 ICKSKYYREYVMEQLNKGNTFTHYGKIPLKYQTKPSKAATQKARQQAEAR    147
                     |..:|||.:||..||.|||.|||||.:||||||||||...|:||::||||
BL02222___sle    100 INHTKYYSDYVHRQLRKGNQFTHYGGLPLKYQTKPSKEVQQQARKKAEAR    149

BSNT_03412___    148 QKQPAEK--TTQ------------QPKANANKQQNNTPAKARKQDAVAAN    183
                     |:|.|::  |.|            |||..|..:.....|..:||||||||
BL02222___sle    150 QRQGAQQQGTAQKQPQQKQQAAPAQPKKQAQPKAAPKQAAPKKQDAVAAN    199

BSNT_03412___    184 MPGGFSNNDIRLLAQAVYGEARGEPYEGQVAIAAVILNRLNSPLFPNSVA    233
                     ||||||||||.|||||||||||||||:||||:||||||||:||.|||:||
BL02222___sle    200 MPGGFSNNDINLLAQAVYGEARGEPYDGQVAVAAVILNRLDSPTFPNTVA    249

BSNT_03412___    234 GVIFEPLAFTAVADGQIYMQPNETAREAVLDAINGWDPSEEALYYFNPDT    283
                     |||||||||||||||||||.|:|||::|||||||||||||.|.|||||||
BL02222___sle    250 GVIFEPLAFTAVADGQIYMTPDETAKKAVLDAINGWDPSENATYYFNPDT    299

BSNT_03412___    284 ATSPWIWGRPQIKRIGKHIFCE    305
                     |||.||||||||||||||||||
BL02222___sle    300 ATSSWIWGRPQIKRIGKHIFCE    321


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