Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00770 and BL02189

See DNA alignment / Visit BSNT_00770 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence pep-align/BSNT_00770___ydbJ.1.5803.seq
#    -bsequence pep-align/BL02189___ydbJ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00770___ydbJ-BL02189___ydbJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00770___ydbJ-BL02189___ydbJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00770___ydbJ
# 2: BL02189___ydbJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     197/309 (63.8%)
# Similarity:   243/309 (78.6%)
# Gaps:           2/309 ( 0.6%)
# Score: 1040.0
# 
#
#=======================================

BSNT_00770___      1 -MAEPILHIEGLDKKIGSKQILKQISMDVMEGEIIGLLGPNGSGKTTLIR     49
                      ..:|:||||.:||.|..|.|||.|.:...|||||||||||||||||||:
BL02189___ydb      1 MTKQPVLHIENVDKIIDGKTILKDIRLTADEGEIIGLLGPNGSGKTTLIK     50

BSNT_00770___     50 IIVGLLKQNSGSVTISGFQHDTEFEKAMEAVGAIVENPEFYPYLTGWENL     99
                     :|.||:|..|||:.|:||..|.:||||:::||||||||||||||||:|||
BL02189___ydb     51 LITGLIKMKSGSIVINGFPIDRQFEKAIQSVGAIVENPEFYPYLTGYENL    100

BSNT_00770___    100 KHFANMHKKIADERLDEVVERVGLTSAIHDKVKTYSLGMRQRLGIAQAIL    149
                     ||:||||..|..|||:||:.||||..|..||||||||||:||||||||||
BL02189___ydb    101 KHYANMHAGIGRERLEEVISRVGLEDAAEDKVKTYSLGMKQRLGIAQAIL    150

BSNT_00770___    150 HRPKLLILDEPTNGLDPAGMKDFRDHIKELAEMEGTAVLFATHLLREVED    199
                     ||||||||||||||||||||||||:|::||||.||||:|||||||:||||
BL02189___ydb    151 HRPKLLILDEPTNGLDPAGMKDFREHLRELAEEEGTAILFATHLLKEVED    200

BSNT_00770___    200 LCDRVIIIQKGEIKAEVSLQGTGQTTEKAIIEVQPQEKALNWLTGNQYQA    249
                     |||||:|:|||:||:.|.|....:..|||::||||.:|||.||....|:|
BL02189___ydb    201 LCDRVVILQKGKIKSTVVLNQADEKQEKAMLEVQPHDKALQWLKDQGYEA    250

BSNT_00770___    250 ESQDGTIVVEVAKENIPELNRSLVGQDLNVFSITPYTQSLEDEFIKATTA    299
                     .::.|.:.|:|.|..||.||:.||..|::|:||.|:.||||||::..|..
BL02189___ydb    251 RTEKGLLAVKVEKAQIPALNQQLVANDIDVYSIAPFKQSLEDEYMARTNG    300

BSNT_00770___    300 HQEEGEELV    308
                     .:|...:: 
BL02189___ydb    301 IEERNADV-    308


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