Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04835 and BL02158
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence pep-align/BSNT_04835___yurR.1.5803.seq
# -bsequence pep-align/BL02158___yurR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04835___yurR-BL02158___yurR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04835___yurR-BL02158___yurR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04835___yurR
# 2: BL02158___yurR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 251/373 (67.3%)
# Similarity: 296/373 (79.4%)
# Gaps: 27/373 ( 7.2%)
# Score: 1319.0
#
#
#=======================================
BSNT_04835___ 1 MKSYIIVGAGILGASTAYHLAKSGARVTVIDRKEPGQATDAAAGIVCPWL 50
:|:|||.|.|:|||||||||||||
BL02158___yur 1 --------------------------MTLIDRGERGRATDAAAGIVCPWL 24
BSNT_04835___ 51 SQRRNQDWYQLAKGGAQYYKDLIHQLEKDGESDTGYKRVGAISIHTDASK 100
||||||.||:||||||.||.|||.|||.||||||||||.||||:|||..|
BL02158___yur 25 SQRRNQAWYKLAKGGAAYYADLIKQLEADGESDTGYKRTGAISLHTDERK 74
BSNT_04835___ 101 LDKMEERAYKRREDAPEIGDITRLSASETKKLFPILADGYESVHISGAAR 150
|:||||||:.||:||||||:|||||..|||:|||.||:||.|||||||||
BL02158___yur 75 LEKMEERAHLRRKDAPEIGEITRLSHEETKRLFPPLAEGYSSVHISGAAR 124
BSNT_04835___ 151 VNGRALCRSLLSAAEKRGATVIKGNASLLFENGTVTGVQTDAKQFAADAV 200
|||:.|.|||::||:|.||:|:.||||||:|...|||:.|..|:..||.|
BL02158___yur 125 VNGKLLRRSLVNAAKKYGASVVSGNASLLYEGNRVTGISTGGKKIYADQV 174
BSNT_04835___ 201 IVTAGAWANEILKPLGIHFQVSFQKAQIMHFEMTDADTGSWPVVMPPSDQ 250
:|||||||:|:|||||:.|.||:|||||:|..:.|||||||||||||:||
BL02158___yur 175 LVTAGAWADELLKPLGVRFSVSYQKAQIVHLCLPDADTGSWPVVMPPNDQ 224
BSNT_04835___ 251 YILSFDNGRIVAGATHENDAGLDDLRVTAGGQHEVLSKALAVAPGLADAA 300
|||:|::|||||||||||:|.||||||||||.||:.||||||||||..:.
BL02158___yur 225 YILAFEDGRIVAGATHENEAELDDLRVTAGGLHEIFSKALAVAPGLELSE 274
BSNT_04835___ 301 AVETRVGFRPFTPGFLPVVGAVPNVQGLYAANGLGASGLTMGPFLGAELA 350
.:|.||||||||||||||:|::||:.||..||||||||||.||:||||||
BL02158___yur 275 LLEARVGFRPFTPGFLPVIGSLPNICGLLVANGLGASGLTSGPYLGAELA 324
BSNT_04835___ 351 KLVLGKQTELDLSPYHPAGALA- 372
:|.||::.|||::.|.|||||.
BL02158___yur 325 RLALGEEPELDIALYDPAGALES 347
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