Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04771 and BL02135

See DNA alignment / Visit BSNT_04771 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:59
# Commandline: needle
#    -asequence pep-align/BSNT_04771___thrB.1.5803.seq
#    -bsequence pep-align/BL02135___thrB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04771___thrB-BL02135___thrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04771___thrB-BL02135___thrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04771___thrB
# 2: BL02135___thrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     228/309 (73.8%)
# Similarity:   258/309 (83.5%)
# Gaps:           3/309 ( 1.0%)
# Score: 1173.0
# 
#
#=======================================

BSNT_04771___      1 MNEADMLFSVTVPGSTANLGPGFDSVGMALSRYLKLTVFESDKWSFEAET     50
                     |.||||||||||||||||||||||||||||||||:|:||..|:|.|||||
BL02135___thr      1 MTEADMLFSVTVPGSTANLGPGFDSVGMALSRYLRLSVFPHDEWRFEAET     50

BSNT_04771___     51 ETVAGIPAGTDNLIYQVAKRTADLYGKEMPPVHVKVWSDIPLARGLGSSA    100
                     |.|||||.||||||||||||||..:|||:||..|||||||||||||||||
BL02135___thr     51 EVVAGIPEGTDNLIYQVAKRTAAHFGKELPPSLVKVWSDIPLARGLGSSA    100

BSNT_04771___    101 AAIVAAIELADELCGLKLSEADKLHLASLEEGHPDNAGASLVGGLVIGLH    150
                     |||.||:|||:||..||||:.:|||.|||||||||||||||.||||||||
BL02135___thr    101 AAIAAAVELANELADLKLSDREKLHFASLEEGHPDNAGASLFGGLVIGLH    150

BSNT_04771___    151 EDDETQMIRVPNADIDVVVVIPFYEVLTRDARDVLPKEFPYADAVKASAV    200
                     |:|||:|:.:.:.|:|||||||||||||:|||||||:...|..||:||||
BL02135___thr    151 EEDETEMVSMKDIDLDVVVVIPFYEVLTKDARDVLPESLSYPKAVEASAV    200

BSNT_04771___    201 SNILIAAIMSKDWPLVGKIMKKDMFHQPYRAMLVPELSKVEHVAEMKGAY    250
                     ||:|:|.:|:|||.|||::|:||:||||||..||||||||||.|...||:
BL02135___thr    201 SNMLVAGLMAKDWKLVGRMMQKDLFHQPYRRALVPELSKVEHEAGQNGAF    250

BSNT_04771___    251 GTALSGAGPTILVMTEKGKGEELKEQLALHFPHCEVDALTVPKEGSIIER    300
                     ||||||||||||...||||||.|:.|||..|||||||.|.||..|.|:||
BL02135___thr    251 GTALSGAGPTILSFIEKGKGEALRNQLASKFPHCEVDCLYVPDTGIIVER    300

BSNT_04771___    301 NPLYQVKSV    309
                     ..:..|   
BL02135___thr    301 KSVNSV---    306


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