Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04797 and BL02123
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:01
# Commandline: needle
# -asequence pep-align/BSNT_04797___pucR.1.5803.seq
# -bsequence pep-align/BL02123___pucR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04797___pucR-BL02123___pucR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04797___pucR-BL02123___pucR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04797___pucR
# 2: BL02123___pucR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 539
# Identity: 352/539 (65.3%)
# Similarity: 420/539 (77.9%)
# Gaps: 15/539 ( 2.8%)
# Score: 1796.5
#
#
#=======================================
BSNT_04797___ 1 MNIFDVMKIPAFENANLIAGKAGGEREVQHVNMMDAPDIADFLHKNELLV 50
|||:|:||:|.|:.|.|.|||||..|.::|:||||||||||:||..||||
BL02123___puc 1 MNIYDMMKLPVFKGATLAAGKAGVTRNIEHINMMDAPDIADYLHHGELLV 50
BSNT_04797___ 51 TTAYHLKDHPHQLSELIRQMAKRGCAGLGIKTKRYLEDIPKEIIELADSY 100
||||||||.|..|.|||.:|.:|||||||||| |:|::||.|:|:|||..
BL02123___puc 51 TTAYHLKDRPFLLKELIERMIRRGCAGLGIKT-RFLQEIPDEVIKLADER 99
BSNT_04797___ 101 AFPIIELPEHIRLGDIVNATLSHILDMRSNELQQAIYAHKKFTNHIMSGK 150
.||||||.|.:|||||||.|||||||.|:.||:|||.|.||||:||||||
BL02123___puc 100 TFPIIELNEDVRLGDIVNHTLSHILDKRTAELEQAIAAQKKFTSHIMSGK 149
BSNT_04797___ 151 GLQSLLKKVSDLLQLPVLLLDQHAKMLSASHQISVETEKLKGTLNTVSGP 200
.:||||..||.:|:|||||.:||.|.:::|...:. |||:...|.
BL02123___puc 150 SIQSLLHNVSAVLKLPVLLFNQHLKPIASSKADAA------GTLSDYEGI 193
BSNT_04797___ 201 F-------FTCFSTISDQKTYSVLPIYNHEKNCGYLLIPDMVQAGDKGLI 243
| .||||||.|::||||.|||.|||.||:|::..|:...||||:
BL02123___puc 194 FQKGNRTGLTCFSTIPDKQTYSVFPIYTHEKKCGFLVVCGMISPSDKGLL 243
BSNT_04797___ 244 LTIEQAANVISFELLKENALKQFSRRARNEFFSNFIERSFSSDDEIKNRA 293
||:|||||||:|||||||||||:.||||||||.||::.:|||.:||||||
BL02123___puc 244 LTLEQAANVIAFELLKENALKQYLRRARNEFFRNFLDGAFSSAEEIKNRA 293
BSNT_04797___ 294 KEFKLRWDQKYMCIAGKLDRNDESISFTENQLASDSVFEFLEGELSAFPF 343
|||:|:|||||:||||||||.::|:|||||||.||||||.||.||..|||
BL02123___puc 294 KEFQLKWDQKYVCIAGKLDRREKSLSFTENQLESDSVFERLEEELVDFPF 343
BSNT_04797___ 344 PPHFFMKGNVGIILIEATDSWSEMHASVISFLEQFQTQVSAQFKRTVSFG 393
|||.|.|||:..:|.||||||:||:|:|..||:.||...|..|:||:|||
BL02123___puc 344 PPHLFTKGNICFLLAEATDSWAEMNAAVGGFLKAFQRHASEHFQRTISFG 393
BSNT_04797___ 394 ISNICQKLIDVPDAFTEASDALQSGHLSRSTAFIQVYHAKDVPELLRLLP 443
|||:..:|.|||....||.|||.|||||.||.|||.||.|||.||||::|
BL02123___puc 394 ISNLSHQLRDVPHICKEAVDALHSGHLSGSTEFIQTYHMKDVSELLRMIP 443
BSNT_04797___ 444 VEDLKKFYNSTLQSLAEKQQEDQSLLHTLSVYLETHCQISETAKRLYVHR 493
.:|||.||...|..||...::|..||.||||||||||||||||||||:||
BL02123___puc 444 ADDLKTFYTHALHQLASLPKDDPGLLQTLSVYLETHCQISETAKRLYIHR 493
BSNT_04797___ 494 NTVIYRLEKCEELLGKSLKDPETTMRLRLALRMQRLIS- 531
||||||||||||||||||||.:||:|||||||:|.|:.
BL02123___puc 494 NTVIYRLEKCEELLGKSLKDADTTLRLRLALRIQMLLGL 532
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