Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00616 and BL02044

See DNA alignment / Visit BSNT_00616 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:14
# Commandline: needle
#    -asequence pep-align/BSNT_00616___hxlR.1.5803.seq
#    -bsequence pep-align/BL02044___hxlR.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00616___hxlR-BL02044___hxlR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00616___hxlR-BL02044___hxlR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00616___hxlR
# 2: BL02044___hxlR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 120
# Identity:      91/120 (75.8%)
# Similarity:   100/120 (83.3%)
# Gaps:           5/120 ( 4.2%)
# Score: 472.0
# 
#
#=======================================

BSNT_00616___      1 MSRMDDKRFNCEKELTLAVIGGKWKMLILWHLGKEGTKRFNELKTLIPDI     50
                     ||||::|.|||||||||.:|||||||||||.|||||||||.|||.|:|.|
BL02044___hxl      1 MSRMENKTFNCEKELTLNIIGGKWKMLILWFLGKEGTKRFGELKALMPGI     50

BSNT_00616___     51 TQKILVNQLRELEQDMIVHREVYPVVPPKVEYSLTPHGESLMPILEAMYE    100
                     ||::|||||||||:|.|||||||||||||||||||..|||||||||||||
BL02044___hxl     51 TQRMLVNQLRELEEDHIVHREVYPVVPPKVEYSLTKQGESLMPILEAMYE    100

BSNT_00616___    101 WGKGYMELIDIDKNVMKESL    120
                     |||.|     |:.|..|:..
BL02044___hxl    101 WGKNY-----IETNFSKDDK    115


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.