Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03979 and BL02034
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence pep-align/BSNT_03979.1.5803.seq
# -bsequence pep-align/BL02034___yrrI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03979-BL02034___yrrI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03979-BL02034___yrrI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03979
# 2: BL02034___yrrI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 353
# Identity: 184/353 (52.1%)
# Similarity: 222/353 (62.9%)
# Gaps: 75/353 (21.2%)
# Score: 1009.0
#
#
#=======================================
BSNT_03979 0 -------------------------------------------------- 0
BL02034___yrr 1 MLKKPLQLLMWVSIFMLLLLTVYIFLQLRMIWEPVCVLLKSILIPLAIAV 50
BSNT_03979 1 ------------------------MVIYVLFFGGIGWALYKGVPVLIVQL 26
::||.|||.|:|:|.|||||:||.||
BL02034___yrr 51 FITYLLLPVVEKIHRAGVPRTLSILLIYFLFFAGLGYAFYKGVPILIKQL 100
BSNT_03979 27 TDLSENIPMFAETYNGLLLHVHNHTDDWPDGMHHRIDKMIRQTETFFAGT 76
|:|||.||:.|.:|..:|..:|:|||.||||||.|:|:.:.|||.|.|..
BL02034___yrr 101 TELSEGIPVLAASYENMLDQLHHHTDGWPDGMHDRVDRFVNQTEEFVASW 150
BSNT_03979 77 IEGAISGIRNVLDYFLIAATIPFLVFYMVKDIELMKKTVWYLTPKSWRKR 126
:|..|..||.|.||.|:||.||||||||||||:.|||.||||||.|||.|
BL02034___yrr 151 VERTIRSIRFVFDYMLLAAIIPFLVFYMVKDIDTMKKAVWYLTPSSWRAR 200
BSNT_03979 127 GSAFLRDVDDSLGDYIRGQLLVCLILGVIAGISFWVFGLPYPLILGLISG 176
||.|:|||||||||||||||.|||::|:.|.:|||.|.|||||||||:.|
BL02034___yrr 201 GSEFIRDVDDSLGDYIRGQLFVCLVIGLGASLSFWFFDLPYPLILGLVIG 250
BSNT_03979 177 VTNVIPYFGPFIGAVPALLIAMTISVKAVLVVVITVFILQFMEGNILSPF 226
.|||||||||.|||:||:::|..:|.:.|.||:||:.||||:|||||.|.
BL02034___yrr 251 ATNVIPYFGPVIGAIPAVMVAAALSTRLVFVVIITILILQFIEGNILGPL 300
BSNT_03979 227 IVGRSLKMHPVVIMLALLAGGELAGIVGMILAVPATAVLKVMMIHFLRMR 276
:||:||.||||||||.||||||||||:|||||||..||:|||::|||..|
BL02034___yrr 301 VVGKSLHMHPVVIMLGLLAGGELAGIIGMILAVPVMAVIKVMLVHFLAAR 350
BSNT_03979 277 TEH 279
..
BL02034___yrr 351 KA- 352
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