Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03958 and BL02019

See DNA alignment / Visit BSNT_03958 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:58
# Commandline: needle
#    -asequence pep-align/BSNT_03958___yrhA.1.5803.seq
#    -bsequence pep-align/BL02019___yrhA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03958___yrhA-BL02019___yrhA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03958___yrhA-BL02019___yrhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03958___yrhA
# 2: BL02019___yrhA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 307
# Identity:     236/307 (76.9%)
# Similarity:   275/307 (89.6%)
# Gaps:           0/307 ( 0.0%)
# Score: 1261.0
# 
#
#=======================================

BSNT_03958___      1 MTVITDITELIGNTPLLRLKNFDVPEGVAVYAKLEMMNPGGSIKDRLGDM     50
                     |.||.|||||||.||||::.:|.:|:||.:||||||||||||||||||::
BL02019___yrh      1 MNVIKDITELIGKTPLLQILDFRIPKGVNIYAKLEMMNPGGSIKDRLGEV     50

BSNT_03958___     51 LIRDALDSGKVKPGGVIIEATAGNTGIGLALSARKYGLKAIFCVPEHFSR    100
                     ||.:|:.|||:||||.:||||||||||||||:|||:|::.:||||||||.
BL02019___yrh     51 LIAEAIGSGKLKPGGTVIEATAGNTGIGLALAARKHGIRPVFCVPEHFSM    100

BSNT_03958___    101 EKQQIMQALGASIIHTPRQDGMQGAIQKAIQLESEIENSYCVLQFKNRVN    150
                     |||.||:||||.|:||||..||:|||:||::||.||.:|||||||||.||
BL02019___yrh    101 EKQSIMKALGARIVHTPRSAGMKGAIEKALELEKEIPDSYCVLQFKNPVN    150

BSNT_03958___    151 PSTYYKTLGPEMWEALDGNIHTFVAGAGSGGTFAGTASFLKEKNPAVKTV    200
                     |..||||:.||:|..|.|.|..|||||||||||||||.|||||||::|||
BL02019___yrh    151 PLAYYKTIAPEIWNDLGGRIDVFVAGAGSGGTFAGTAKFLKEKNPSIKTV    200

BSNT_03958___    201 IVEPEGSILNGGEPHAHKTEGIGMEFIPDYMNKSHFDKIYTVTDENAFRL    250
                     |||||||||||||||.||||||||||||:||.:|:||:||||.||:||||
BL02019___yrh    201 IVEPEGSILNGGEPHGHKTEGIGMEFIPEYMEESYFDEIYTVLDEDAFRL    250

BSNT_03958___    251 VKEAAEKEGLLIGSSSGAALYAALEEAKKASAGTNIVTVFPDSSDRYISK    300
                     ||||||||||||||||||||:|||:||:||.|||||||:||||||||:||
BL02019___yrh    251 VKEAAEKEGLLIGSSSGAALFAALKEAEKAKAGTNIVTIFPDSSDRYLSK    300

BSNT_03958___    301 QIYEGGI    307
                     :||||||
BL02019___yrh    301 KIYEGGI    307


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