Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00970 and BL02016
See
DNA alignment /
Visit
BSNT_00970 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:30
# Commandline: needle
# -asequence pep-align/BSNT_00970___ydgF.1.5803.seq
# -bsequence pep-align/BL02016___aapA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00970___ydgF-BL02016___aapA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00970___ydgF-BL02016___aapA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00970___ydgF
# 2: BL02016___aapA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 460
# Identity: 394/460 (85.7%)
# Similarity: 433/460 (94.1%)
# Gaps: 2/460 ( 0.4%)
# Score: 2085.0
#
#
#=======================================
BSNT_00970___ 1 MTDDMTKDNINQQTLQRGLKNRHIQLIAIGGAIGTGLFLGSGKSIHFAGP 50
||:|:|.::|::|.|.||||||||||||||||||||||||||||||||||
BL02016___aap 1 MTEDVTDNDIHEQKLSRGLKNRHIQLIAIGGAIGTGLFLGSGKSIHFAGP 50
BSNT_00970___ 51 SILFAYMITGIICFLIMRSLGELLLSNLNYHSFVDFVQDYLGDMAAFITG 100
||||||:|||||||.|||||||||||||.||||||||:||||||||||||
BL02016___aap 51 SILFAYLITGIICFFIMRSLGELLLSNLEYHSFVDFVRDYLGDMAAFITG 100
BSNT_00970___ 101 WTYWFCWISIAMADLTAVGLYTQYWLPGVPQWVPGLIALIILLIMNLATV 150
|||||||||:|||||||||||||||||.||||:|||||||||||||||||
BL02016___aap 101 WTYWFCWISLAMADLTAVGLYTQYWLPDVPQWLPGLIALIILLIMNLATV 150
BSNT_00970___ 151 KLFGELEFWFALIKVIAILALIVIGLVMIFKGFSTSSGVSSFTNLWSHGG 200
||||||||||||||||||||||.|||.||||||||.||.::|.|||||||
BL02016___aap 151 KLFGELEFWFALIKVIAILALIAIGLFMIFKGFSTHSGTAAFHNLWSHGG 200
BSNT_00970___ 201 LFPNGMHGFILSFQMVVFAFVGIELVGLTAGETENPEKVIPKAINNIPVR 250
:||||:|||:|||||||||||||||||||||||::|||||||||||||||
BL02016___aap 201 MFPNGLHGFLLSFQMVVFAFVGIELVGLTAGETKDPEKVIPKAINNIPVR 250
BSNT_00970___ 251 VLLFYIGALLVIMSIYPWDVINPSESPFVQVFVAVGIVGAASIINFVVLT 300
||||||||||||||||||:||||:||||||||.||||:.|||||||||||
BL02016___aap 251 VLLFYIGALLVIMSIYPWNVINPNESPFVQVFAAVGIIAAASIINFVVLT 300
BSNT_00970___ 301 SAASACNSAVFSTSRMVYSLAKDHNAPESMAKLTQRKVPRNALFFSAIVI 350
|||||.||||||||||:|||||:||||.:|.|||.||||.|||||||:||
BL02016___aap 301 SAASASNSAVFSTSRMIYSLAKEHNAPGAMTKLTSRKVPGNALFFSAVVI 350
BSNT_00970___ 351 LIGVTLNYIMPEGVFTLITSISTVCFIYIWGITVICHMKYRKTRPELAKT 400
|||:.|||||||.||||||||||:|||:|||||||||:|||:|||:|||.
BL02016___aap 351 LIGIMLNYIMPEQVFTLITSISTICFIFIWGITVICHLKYRRTRPDLAKR 400
BSNT_00970___ 401 NKFKLPLYPFTNYLILAFLAFVLVVLALAQDTRVSLFVTPVWFILLIVIY 450
||||:|||||:||::|.||||:|:||||||||||||||||||||:||.||
BL02016___aap 401 NKFKMPLYPFSNYVVLGFLAFILIVLALAQDTRVSLFVTPVWFIMLIAIY 450
BSNT_00970___ 451 KVRKAKHQ-- 458
|:||.|.:
BL02016___aap 451 KLRKPKSRQV 460
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.