Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05002 and BL01899

See DNA alignment / Visit BSNT_05002 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:11
# Commandline: needle
#    -asequence pep-align/BSNT_05002___yvgX.1.5803.seq
#    -bsequence pep-align/BL01899___copA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05002___yvgX-BL01899___copA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05002___yvgX-BL01899___copA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05002___yvgX
# 2: BL01899___copA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 812
# Identity:     559/812 (68.8%)
# Similarity:   664/812 (81.8%)
# Gaps:           9/812 ( 1.1%)
# Score: 2890.0
# 
#
#=======================================

BSNT_05002___      1 MLSEQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETSNVIY     50
                      :..|||..:|:||||||||||||||||||:.||.|||||||.|.|.::|
BL01899___cop      1 -MDGQKEATLQISGMTCAACAARIEKGLKRLDGVQDANVNLALEKSKIVY     49

BSNT_05002___     51 DPAETGTAAIQEKIEKLGYHVVTEKAEFDIEGMTCAACANRIEKRLNKIE    100
                     ||.:.....:.||:|.|||.|..|||||.:.||||||||||:||||||:.
BL01899___cop     50 DPGQIEVGQLAEKVESLGYQVPAEKAEFAVSGMTCAACANRVEKRLNKLS     99

BSNT_05002___    101 GVANAPVNFALETVTVEYNPKEASVGDLKEAVDKLGYKLKLKGEQDSEA-    149
                     ||.:|.||||:||.||:|:....|..::.|||:||||||:||.::.::. 
BL01899___cop    100 GVKSAAVNFAIETATVDYHAGAVSPEEMIEAVEKLGYKLELKKDRTADGR    149

BSNT_05002___    150 AAAKKKEERKQTARLIFSAVLSFPLLWAMVSHFTFTSFIWVPDIFLNPWM    199
                     |..::|:.::||.:.||||:|||||||||||||.||||||:|.:|::||:
BL01899___cop    150 AEQREKDIQRQTGKFIFSAILSFPLLWAMVSHFKFTSFIWLPGMFMDPWV    199

BSNT_05002___    200 QFALATPVQFLIGWPFYVGAYKALRNKSANMDVLVALGTTAAYAYSLYLT    249
                     ||||||||||::|..||.|||||||||||||||||||||:|||.|||||:
BL01899___cop    200 QFALATPVQFIVGKQFYTGAYKALRNKSANMDVLVALGTSAAYFYSLYLS    249

BSNT_05002___    250 FQSLGSHGHTDGLYYETSAILLTLILLGKLFETKAKGRSSDAIKKLMKLQ    299
                     .:|||::.|.|||||||||||||||:||||||.|||||||:||||||.||
BL01899___cop    250 IESLGTNRHPDGLYYETSAILLTLIILGKLFEAKAKGRSSEAIKKLMGLQ    299

BSNT_05002___    300 AKTATVVRDGQEQIIPIDEVLVNDIVYVKPGERIPVDGEVVEGRSAVDES    349
                     ||||||||:|:|..:||:.||..||:||||||::|.|||:||||||:|||
BL01899___cop    300 AKTATVVRNGEEMTVPIENVLAGDIMYVKPGEKVPADGEIVEGRSALDES    349

BSNT_05002___    350 MITGESLPVDKNPGDSVTGSTVNANGFLKIKAVNVGKDTALSHIIKIVEE    399
                     ||||||:||||..||.|.|:|:|.|||||::|..|||||||:.|||:|||
BL01899___cop    350 MITGESIPVDKTVGDPVIGATINKNGFLKVRAEKVGKDTALAQIIKVVEE    399

BSNT_05002___    400 AQGSKAPIQRLADQISGIFVPIVLGIAVLTFLIWYLWAAPGDFAEAISKF    449
                     |||||||||||||:|||:|||||:.||.:||.||||..:||:|..|:.|.
BL01899___cop    400 AQGSKAPIQRLADRISGVFVPIVVAIAAITFFIWYLAVSPGEFGTALEKL    449

BSNT_05002___    450 IAVLVIACPCALGLATPTSIMAGSGRAAEFGILFKGGEHLEKTHRLDTIV    499
                     |||||||||||||||||||||||||||||||||||||||||..|||:|||
BL01899___cop    450 IAVLVIACPCALGLATPTSIMAGSGRAAEFGILFKGGEHLETAHRLETIV    499

BSNT_05002___    500 LDKTGTVTNGKPRLTDAIPFGHFEEKDLLQFAAAAETGSEHPLGEAIIAG    549
                     ||||||||||||:|||..|....:|...|:...|||..|||||.|||:.|
BL01899___cop    500 LDKTGTVTNGKPQLTDVRPEPWIDETSFLKLIGAAEKSSEHPLAEAIVEG    549

BSNT_05002___    550 VKDKGLEIPKLTRFEAKVGAGILAEAGGKSILVGTRKLMESEQVEHGALL    599
                     :|:||:|......|||..|.||.|....|.||:|||:|||:..::.....
BL01899___cop    550 IKEKGIEPASADSFEAIPGYGIEAAVNEKRILIGTRRLMENRDIDIQDAN    599

BSNT_05002___    600 AQMEELEAEGKTVMLVSIDGEAAGLVAVADTIKDTSRKAVARLKELGLDV    649
                     .:|||||.:|||.||.::||..|||:||||||||||:.||.||.::||:|
BL01899___cop    600 GEMEELETQGKTAMLAAVDGRFAGLIAVADTIKDTSKAAVKRLHDMGLEV    649

BSNT_05002___    650 IMMTGDNRRTAEAIAKEAGIANIIAEVLPEQKAAEIARLQKEGRQTAMVG    699
                     :|:||||||||||||.||||.::|||||||.||.|:.::|.:|::.||||
BL01899___cop    650 VMITGDNRRTAEAIAAEAGIHHVIAEVLPEGKADEVKKIQAKGKKVAMVG    699

BSNT_05002___    700 DGINDAPALATADIGMAIGTGTDIAMETADITLIRGDLNSIADAIRMSRL    749
                     ||||||||||.||.|||||||||:|||.||:||||||||||||||.||||
BL01899___cop    700 DGINDAPALAAADTGMAIGTGTDVAMEAADVTLIRGDLNSIADAILMSRL    749

BSNT_05002___    750 TMKNIKQNLFWALGYNSLGIPIAALGFLAPWIAGAAMAFSSVSVVLNALR    799
                     |:||||||||||..|||:|||.||:|.|||||||||||||||||||||||
BL01899___cop    750 TIKNIKQNLFWAFAYNSIGIPFAAVGLLAPWIAGAAMAFSSVSVVLNALR    799

BSNT_05002___    800 LQKVK-------    804
                     |||||       
BL01899___cop    800 LQKVKLDWRNPS    811


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05002 and BL01899

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
