Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05003 and BL01898

See DNA alignment / Visit BSNT_05003 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:12
# Commandline: needle
#    -asequence pep-align/BSNT_05003___yvgY.1.5803.seq
#    -bsequence pep-align/BL01898___copZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05003___yvgY-BL01898___copZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05003___yvgY-BL01898___copZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05003___yvgY
# 2: BL01898___copZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 69
# Identity:      49/69 (71.0%)
# Similarity:    58/69 (84.1%)
# Gaps:           0/69 ( 0.0%)
# Score: 250.0
# 
#
#=======================================

BSNT_05003___      1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADK     50
                     ||||||:||||||.|||:|||.:||:|.||.:|.|||..|||:||||:.|
BL01898___cop      1 MEQKTLKVEGMSCNHCVQAVEGNVGKLGGVESVKVNLNEGKVEVSFDSGK     50

BSNT_05003___     51 VSVKDIADAIEDQGYDVAE     69
                     ||:|:|.|.|||||||||.
BL01898___cop     51 VSLKEIIDTIEDQGYDVAG     69


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