Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01849 and BL01875
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:21
# Commandline: needle
# -asequence pep-align/BSNT_01849.1.5803.seq
# -bsequence pep-align/BL01875___yisT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01849-BL01875___yisT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01849-BL01875___yisT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01849
# 2: BL01875___yisT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 205
# Identity: 75/205 (36.6%)
# Similarity: 115/205 (56.1%)
# Gaps: 45/205 (22.0%)
# Score: 393.5
#
#
#=======================================
BSNT_01849 1 MGCHSFAIERETDEKNEFLRKGGMLMT-DAKQFYDYHSWANKKIFTHIEN 49
|| .|.:..|||:|||:::.||:::
BL01875___yis 1 -------------------------MTHSALKHLDYHNWANQRVLTHLKS 25
BSNT_01849 50 LPEETAYQEVKSVFPSVSDVLLHMCRADYIWLNVLSGVAYQEIIDSAGKL 99
||||...:|:||||.:||:|:.|||.||.:||.::||.||:|..::..:|
BL01875___yis 26 LPEELFTREIKSVFQTVSEVVTHMCVADALWLKIISGAAYEEAKETGMRL 75
BSNT_01849 100 ESAQGNMAAIKQ----------HAAELESQYHDFFSRQTNLEQTFTMQHP 139
:. .:|: |...| ||..||....:.:...|:.||
BL01875___yis 76 KE------GLKRKKIDDFISIFHDTAL--QYEAFFENLEDPDGEITIAHP 117
BSNT_01849 140 KLGTLESTYADTILHVVNHGTYHRGNVTAMLRQLGHSGVPTDYMYYLYEK 189
.||.:::..::.:.||||||||||||::|||||:|.:||||||:|||...
BL01875___yis 118 ILGEIKTPISEILHHVVNHGTYHRGNISAMLRQMGEAGVPTDYIYYLLSL 167
BSNT_01849 190 RESKG 194
:::.
BL01875___yis 168 KQTT- 171
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