Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00382 and BL01842
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence pep-align/BSNT_00382.1.5803.seq
# -bsequence pep-align/BL01842___ybfB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00382-BL01842___ybfB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00382-BL01842___ybfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00382
# 2: BL01842___ybfB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 422
# Identity: 200/422 (47.4%)
# Similarity: 236/422 (55.9%)
# Gaps: 140/422 (33.2%)
# Score: 1041.0
#
#
#=======================================
BSNT_00382 1 MKR-LHYAWIIVSVTFLILLAVQGVRLSFGAFVEPWERQFSIDRSTISLI 49
||| :|||||||.||||.||||||||||||||::|||.:||:||.|||||
BL01842___ybf 1 MKRKIHYAWIIVFVTFLTLLAVQGVRLSFGAFIQPWEEEFSMDRGTISLI 50
BSNT_00382 50 STVSFIVYGISQPVIGRLVDKWGARAVLAWSALLTGVSIFLTYLVTSPWQ 99
|.:||||||:||||||||||::|.|.:|:.|.||.|:|||.|||||||||
BL01842___ybf 51 SMLSFIVYGVSQPVIGRLVDRFGPRIILSLSTLLVGLSIFFTYLVTSPWQ 100
BSNT_00382 100 LFLLYGLGVSLGVGGASNVAASVLVVNWFSKKRGLAFGTMEAGFGAGQML 149
||:|||:.||||||||||||::|:|.|||::|||||||.|||||||||||
BL01842___ybf 101 LFILYGIIVSLGVGGASNVASTVIVTNWFNEKRGLAFGIMEAGFGAGQML 150
BSNT_00382 150 LVPGSLMLIHWFSWKLTVVVLGLLLILIVFPAALLMLRNNPSEKNTEPIG 199
|||||||:||||:||:||:||||.|.:||||..:|:|||:|||||.:|||
BL01842___ybf 151 LVPGSLMMIHWFNWKVTVIVLGLFLAVIVFPIVILLLRNHPSEKNVQPIG 200
BSNT_00382 200 GLAASEKETAP--KTTALSVAGMFRMRQFWFLIFPFLICGFTTVGLMDTH 247
|....|.:..| :...:....:|..|.||||:.||.||||||.||||||
BL01842___ybf 201 GAQGGEIKEEPDAQPKKIPYKAVFLKRTFWFLVLPFFICGFTTTGLMDTH 250
BSNT_00382 248 LIPFSHDHGFSTTVTSAAVSLLAGL----ILLASCCPEL----------- 282
||||||||||||.|||||||||||. ||::....:.
BL01842___ybf 251 LIPFSHDHGFSTEVTSAAVSLLAGFNIIGILISGVVADRWSSRKILCFLY 300
BSNT_00382 282 -------------------------------------------------- 282
BL01842___ybf 301 AVRALSLVILLSSHNSMLLLCFAVLFGLVDFATVAPTQMLATQYFRQYSV 350
BSNT_00382 282 -------------------------------------------------- 282
BL01842___ybf 351 GFILGWLFLSHQIGSALGAYLPGVWYSQTGNYNLSFYLSIVILAVASILN 400
BSNT_00382 282 ---------------------- 282
BL01842___ybf 401 ILLPEPKKINPTLNQEGRSVQQ 422
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