Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00308 and BL01731

See DNA alignment / Visit BSNT_00308 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence pep-align/BSNT_00308.1.5803.seq
#    -bsequence pep-align/BL01731___ybbA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00308-BL01731___ybbA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00308-BL01731___ybbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00308
# 2: BL01731___ybbA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:      84/261 (32.2%)
# Similarity:   140/261 (53.6%)
# Gaps:          11/261 ( 4.2%)
# Score: 443.5
# 
#
#=======================================

BSNT_00308         1 -MKGSLSEHKAGNRRFTLYLPPSYSTDSGGFPAVYVQDGSSLF----QNQ     45
                      :.|:|.:.....|...:||||||.:....:|.:||.|...||    .|.
BL01731___ybb      1 MIDGTLIKDTCFGRELLIYLPPSYGSGENRYPVLYVHDLGDLFDPAYSNS     50

BSNT_00308        46 IELLESAFQQQRLPELVLIGIEPENRLDEYTPWPAASLSDRFTDFGGMGY     95
                     :..:|..|..|.:|||:|:|:.|::|..||||:|...|.....::||.|.
BL01731___ybb     51 LRSIEKLFSSQEVPELLLVGVAPKDRESEYTPFPKRHLLPNKREYGGKGN    100

BSNT_00308        96 HYLSDITNQFIPLIEENWNVTREPQSRGMIGASLGGLISMFAILKYPSMF    145
                     .|.:.:.|:..|.|:.::......:..|:||.|.|||||::........|
BL01731___ybb    101 EYAAFLANRLKPHIDRHYRTNPSREQTGIIGKSFGGLISVYTAFLASETF    150

BSNT_00308       146 GKIGSISGSYWYENAAETIHISSLKPGTARVFMSIGSEEGCEKQSIQRHM    195
                     |||||:|||:|:|...|.:..:..:....|::|.:||.||.::.::|:.|
BL01731___ybb    151 GKIGSLSGSFWFEGITEFMKNNRFENKHLRIYMDVGSTEGTDRDNLQKEM    200

BSNT_00308       196 LKKTKQVHQSLKEKGFTEDQLCLSIEKGAVHHRKYFCKQFINALEWLYGK    245
                     :.:||:....|.|...:|.:|...|::|..|..:.|.|:|..|::||:|.
BL01731___ybb    201 IPRTKEAFSLLTESAASEKELKFVIDEGGSHRLERFAKRFPEAVKWLFGS    250

BSNT_00308       246 NRSTL------    250
                     ..::.      
BL01731___ybb    251 CHNSARNGRSF    261


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