Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00633 and BL01730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:15
# Commandline: needle
# -asequence pep-align/BSNT_00633___ycxD.1.5803.seq
# -bsequence pep-align/BL01730___ycxD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00633___ycxD-BL01730___ycxD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00633___ycxD-BL01730___ycxD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00633___ycxD
# 2: BL01730___ycxD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 450
# Identity: 287/450 (63.8%)
# Similarity: 356/450 (79.1%)
# Gaps: 7/450 ( 1.6%)
# Score: 1504.0
#
#
#=======================================
BSNT_00633___ 1 MEKYMSLLMRIEEMMQSTAYQEGDRLPSIRQLSARYQVSKSTVIRALQEL 50
|.||::|:..:|:|::..::||||||||||.|:.|::||||||||||.||
BL01730___ycx 1 MHKYVALMNELEDMIEDKSFQEGDRLPSIRALAIRFKVSKSTVIRALNEL 50
BSNT_00633___ 51 EKRHLIYSVPKSGYYIVKKTGKSRSGQPGPIDFATSAPDPDVFPYLDFQH 100
|:|||||||||||||:||||.:..:.....||||.||||||||||:||||
BL01730___ycx 51 ERRHLIYSVPKSGYYVVKKTNQRPNSGKAVIDFAASAPDPDVFPYIDFQH 100
BSNT_00633___ 101 CINKAIDTYKNDLFIYGTPKGLPSLIRVLRKLLATQQVFADERHIFITSG 150
||||||||||||||||||||||||||:.::|.||..||||.|.|||||||
BL01730___ycx 101 CINKAIDTYKNDLFIYGTPKGLPSLIQAVQKELANSQVFAKEEHIFITSG 150
BSNT_00633___ 151 VQQALSLLCAMPFPNGKEKIAIEQPGYHLMVEQLETLGIPAIGVKRTEEG 200
|||||:||.:|||||.|.|:.||||.|||:::.||..||||:|::||.||
BL01730___ycx 151 VQQALALLASMPFPNRKRKVLIEQPSYHLLIKYLEVHGIPAVGIERTAEG 200
BSNT_00633___ 201 LDIAEVERLFQTESIKFFYTMPRFHNPLGYSLSERDKQELVRLAEAYDVY 250
:|:.|:||:||||.|||||||||||||||.|.:||:|..:|:|||.||||
BL01730___ycx 201 IDMDELERIFQTEDIKFFYTMPRFHNPLGTSYTEREKTAIVKLAEKYDVY 250
BSNT_00633___ 251 LVEDDYLGDLEENKKADPLYAYDLSSHVIYLKSFSKMMFPGLRVGAAVLP 300
:.|||:|||||.:||||||:.||:||||||||||||::||||||||||||
BL01730___ycx 251 IAEDDFLGDLENDKKADPLHYYDISSHVIYLKSFSKIIFPGLRVGAAVLP 300
BSNT_00633___ 301 EALTDTFYAYKKLNDIDCSMISQAALEIYLKSGMYGRHKEKIRDSYKERS 350
::||..|..||:|.|||.||:|||||||||||||:.:||:|||.||::||
BL01730___ycx 301 DSLTIVFNRYKQLLDIDSSMLSQAALEIYLKSGMFEKHKQKIRSSYQKRS 350
BSNT_00633___ 351 LKLHQAI-QTHRQLGSGRFTFSSGQAPCMHTHLVLPQDLPASRVIHRLKK 399
..||..: :....||. .|.|.....|.:|||:.|.:.:||||:|..|:|
BL01730___ycx 351 CLLHDLLKECSASLGD-VFEFHPPAQPAIHTHIELDRTIPASRLIKSLQK 399
BSNT_00633___ 400 QGVLLEAIDRHYLSDYQKENLLKINISNVKTEDIERGVKLLMSHL----- 444
:.||||.::.||:..:.|.||||||.||||.|||..|::.|...:
BL01730___ycx 400 RDVLLEPVNAHYMPAFPKRNLLKINTSNVKEEDIRSGIERLRQAVETAYF 449
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