Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00626 and BL01728

See DNA alignment / Visit BSNT_00626 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:14
# Commandline: needle
#    -asequence pep-align/BSNT_00626___srfAC.1.5803.seq
#    -bsequence pep-align/BL01728___lchAC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00626___srfAC-BL01728___lchAC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00626___srfAC-BL01728___lchAC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00626___srfAC
# 2: BL01728___lchAC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1284
# Identity:     735/1284 (57.2%)
# Similarity:   960/1284 (74.8%)
# Gaps:          22/1284 ( 1.7%)
# Score: 3895.0
# 
#
#=======================================

BSNT_00626___      1 -----------MYYLSPMQEGMLFHAILNPGQSFYLEQITMKVKGSLNIK     39
                                :|||||||||||||.:|:|||.||:|||:|:||||....
BL01728___lch      1 MSQFKKEHVQDIYYLSPMQEGMLFHTLLHPGQGFYIEQISMQVKGSFQKD     50

BSNT_00626___     40 CLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEIDLTHLTG     89
                     .||:|||||:.|||:|||||:|||:|||||||||:|.|..|||||:.|:.
BL01728___lch     51 VLEKSMNVIIGRYDIFRTVFVHEKMKRPVQVVLKERSFQAEEIDLSGLSE    100

BSNT_00626___     90 SEQTAKINEYKEQDKIRGFDLTRDIPMRAAIFKKAEESFEWVWSYHHIIL    139
                     :||..:|.:||.:||.:||:|::|||||.|:|||.::.:|||||||||:|
BL01728___lch    101 AEQNERIEDYKRKDKEKGFNLSKDIPMRTAVFKKGQDRYEWVWSYHHILL    150

BSNT_00626___    140 DGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQASLR    189
                     ||||||||||:||:|||||||.:||||.||:|||:||||||.||||.||.
BL01728___lch    151 DGWCFGIVVQELFEVYNALRENRPYSLGPVRPYKEYIKWLESQDKQKSLV    200

BSNT_00626___    190 YWREYLEDFEGQTTFAEQRKK-QKDGYEPKELLFSLPEAETKAFTELAKS    238
                     ||..:|..|||||||:||||. ::.|.:|:||||:||:.:|:|||:|||:
BL01728___lch    201 YWEHHLAGFEGQTTFSEQRKNPEQAGNQPEELLFTLPKEDTEAFTQLAKA    250

BSNT_00626___    239 QHTTLSTALQAVWSVLISRYQQSGDLAFGTVVSGRPAEIKGVEHMVGLFI    288
                     .|||||||||||||||:||||:|.||.||||||||||:|:||||||||||
BL01728___lch    251 HHTTLSTALQAVWSVLLSRYQRSRDLIFGTVVSGRPADIQGVEHMVGLFI    300

BSNT_00626___    289 NVVPRRVKLSEGITFNGLLKQLQEQSLQSEPHQYVPLYDIQSQADQPKLI    338
                     ||||:|.......||..|:..||:|:|::|||||||||:|||....|.||
BL01728___lch    301 NVVPKRATFGPQTTFTELVADLQKQALEAEPHQYVPLYEIQSHIAAPNLI    350

BSNT_00626___    339 DHIIVFENYPLQDAKNEESSEN-GFDMVDVHVFEKSNYDLNLMASPGDEM    387
                     ||||||||||||:|..::..:| ||.|.::.|||||||||||:||||:||
BL01728___lch    351 DHIIVFENYPLQEANKQQKEKNLGFTMDEISVFEKSNYDLNLLASPGEEM    400

BSNT_00626___    388 LIKLAYNENVFDEAFILRLKSQLLTAIQQLIQNPDQPVSTINLVDDRERE    437
                     ::|||||.|:|:.:||||||.||||||:::|::|:||:..|.:|..:|:|
BL01728___lch    401 MLKLAYNRNIFEPSFILRLKEQLLTAIREVIRDPEQPLDDICVVSKKEKE    450

BSNT_00626___    438 FLLTGLNPPAQAHE---TKPLTDWFKEAVNVNPDAPALTYSGQTLSYREL    484
                     .||...|...|..:   |.|  .||::.....|:.||::.:|:||:||||
BL01728___lch    451 RLLHEFNGQVQRKQIGLTIP--QWFEQYAEALPEKPAVSAAGRTLTYREL    498

BSNT_00626___    485 DEEANRLARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKAGAAYLPVD    534
                     :|:||::|..|:|...|:|..|||..:||.|:||.||.|||||.||||:|
BL01728___lch    499 NEKANKVAHLLRKKNVGRGEPVALLFRRSPEMVIAILAVLKAGGAYLPID    548

BSNT_00626___    535 PKLPEDRISYMLADSAAACLLTHQKMKEQAAELPYTGTTLFIDDQTRFEE    584
                     |:.||.||.|||.||.|.|:||.:::..:||.|.:...|:.|||.....|
BL01728___lch    549 PEYPEARIQYMLEDSGAVCMLTQEELAGRAASLSFHKHTILIDDPAVSAE    598

BSNT_00626___    585 QASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGLVKHVDYMAFS    634
                     ...:...|.:|:|.||||||||||||||||:||||||..:||..:|::.|
BL01728___lch    599 SGRNLEIAAEPDDLAYIMYTSGTTGKPKGNLTTHANITRVVKETNYISLS    648

BSNT_00626___    635 EKDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQ    684
                     ||||.||:||||||.||||.|.::||.|:|::||:.|:|...:||:.|.:
BL01728___lch    649 EKDTLLSLSNYAFDGFTFDLYGALLNGAKLVVADQATILHIGKLTEAIQK    698

BSNT_00626___    685 ENVNVMFATTALFNLLTDAGEDWMKGLRCILFGGERASVPHVRKALRVMG    734
                     ||:.|||.||||||||.|||..||||:|.:||||||:||.||:||...||
BL01728___lch    699 ENITVMFVTTALFNLLVDAGTGWMKGIRKVLFGGERSSVSHVKKAFAAMG    748

BSNT_00626___    735 PGKLINCYGPTEGTVFATAHVVHDIPDSISSLPIGKPISNASVYILNEQS    784
                     |.::|:.|||||.|||||.:.|:.:.||..|:||||||:..:.|||.|.:
BL01728___lch    749 PDRIIHVYGPTETTVFATFYPVNRMEDSAVSIPIGKPINETNAYILTENN    798

BSNT_00626___    785 QLQPFGAIGELCISGMGVSKGYVNRADLTKEKFIKNPFKPGETLYRTGDL    834
                     :|||.||:||||:||.|||:||:||.:||.|||..:||..|||:||||||
BL01728___lch    799 RLQPIGAVGELCLSGTGVSRGYLNRPELTAEKFAPHPFNSGETMYRTGDL    848

BSNT_00626___    835 ARWLPDGTIEYAGRIDDQVKIRGHRIELEEIEKQLQEYPGVKDAVVVADR    884
                     |||||||.|::.||||||||||||||||.|||:||....|||:|||.|.:
BL01728___lch    849 ARWLPDGNIDFIGRIDDQVKIRGHRIELGEIEEQLMRCQGVKEAVVTARK    898

BSNT_00626___    885 HESGDASINAYL--VNRTQLSAEDVKAHLKKQLPAYMVPQTFTFLDELPL    932
                     ..:|||::.||:  |..|:::.|:|:..|.::|||||||..:..|:||||
BL01728___lch    899 SGNGDAALTAYVVPVQGTEVANEEVRRQLARRLPAYMVPAAYIMLEELPL    948

BSNT_00626___    933 TTNGKVNKRLLPKPDQDQLAEEWIGPRNDMEETIAQIWSEVLGRKQIGIH    982
                     |.|||||:||||:.|....:.|...|||..||.:|.||||||||:||||.
BL01728___lch    949 TANGKVNRRLLPEADGRPNSTERRAPRNATEEKLAVIWSEVLGRQQIGID    998

BSNT_00626___    983 DDFFALGGHSLKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYVKNGG   1032
                     ::||.:||||||||..|||:.|:|.||:||.:|||.|||.|::||:..||
BL01728___lch    999 ENFFEIGGHSLKAMAVASRMLKDLAIDVPVNVLFEMPTIEGLAAYIDQGG   1048

BSNT_00626___   1033 PDGLQNVTIMNQDQEQIIFAFPPVLGYGLMYQNLSSRLPSYKLCAFDFIE   1082
                     .......|:.||...:.:||||||||||:||..|:.::|.|::.||||||
BL01728___lch   1049 HVDEVKKTVFNQASTRHLFAFPPVLGYGIMYGKLAEQMPEYRIHAFDFIE   1098

BSNT_00626___   1083 EEDRLDRYADLIQKLQPEGPLTLFGYSAGCSLAFEAAKKLEEQGRIVQRI   1132
                     .:||..|||:.|..|||||||||.||||||.||||.|:.||:.||.|:::
BL01728___lch   1099 SDDRAVRYAEAISDLQPEGPLTLIGYSAGCGLAFEVAQALEKNGRKVEKL   1148

BSNT_00626___   1133 IMVDSYKKQGVSDLDGRTVESDVEALMNVNRDNEALNSEAVKQGLKQKTH   1182
                     :|:|||.|..||||:||::|:|..|||..|:|||.:..:.|..|:.:|..
BL01728___lch   1149 LMIDSYMKNDVSDLEGRSIEADTAALMEANKDNEYMKIKTVADGIAKKMT   1198

BSNT_00626___   1183 AFYSYYVSLISTGQVKADIDLLTSGAAFDMPEWLASWEEATTGAYRMKRG   1232
                     |:|||:|:|:..|.|.::|.|:.|..|..:|.||:.|:|.|..:|...:|
BL01728___lch   1199 AYYSYFVNLVHQGTVSSEIHLIKSEHAKPLPAWLSLWKEGTESSYDEYQG   1248

BSNT_00626___   1233 FGTHAEMLQGETLDRNAEILLEFLNTQTVTVS--   1264
                     .|.|.|||....:..||:::.:.|..:...:.  
BL01728___lch   1249 AGRHDEMLADGFVKSNADLIRQILGERAAVIGGA   1282


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_00626 and BL01728

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
