Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00541 and BL01703

See DNA alignment / Visit BSNT_00541 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:10
# Commandline: needle
#    -asequence pep-align/BSNT_00541___ldh.1.5803.seq
#    -bsequence pep-align/BL01703___ldh.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00541___ldh-BL01703___ldh.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00541___ldh-BL01703___ldh.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00541___ldh
# 2: BL01703___ldh
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     255/321 (79.4%)
# Similarity:   287/321 (89.4%)
# Gaps:           2/321 ( 0.6%)
# Score: 1363.0
# 
#
#=======================================

BSNT_00541___      1 MMNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMD     50
                     |.|:.||:..|||||||||||||.|||||||||||:||:||:||||||||
BL01703___ldh      1 MRNQKVNRTVLIGAGFVGSSYAFTLINQGITDELVIIDLNKDKAMGDVMD     50

BSNT_00541___     51 LNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNL    100
                     |||||||||.||||.||||:|||:|||||:|||||||||||||:||||||
BL01703___ldh     51 LNHGKAFAPHPVKTWYGTYDDCKEADIVCVCAGANQKPGETRLDLVEKNL    100

BSNT_00541___    101 KIFKGIVSEVMASGFDGIFLIATNPVDILTYATWKFSGLPKERVIGSGTT    150
                     ||||||:.||||||||||||:|||||||||||||||||||||||||||||
BL01703___ldh    101 KIFKGIIGEVMASGFDGIFLVATNPVDILTYATWKFSGLPKERVIGSGTT    150

BSNT_00541___    151 LDSARFRFMLSEYFGAAPQNVHAHIIGEHGDTELPVWSHANVGGVPVSEL    200
                     ||:||||::||||||.|..|.|.:|||||||||||||||||:||||||:|
BL01703___ldh    151 LDTARFRYLLSEYFGVAAHNAHGYIIGEHGDTELPVWSHANIGGVPVSDL    200

BSNT_00541___    201 VEKNDAYKQEELDQIVDDVKNAAYHIIEKKGATYYGVAMSLARITKAILH    250
                     :::|:.||.|:||::.|:||||||||||||||||||||||||||||||..
BL01703___ldh    201 LKRNEKYKAEDLDELFDNVKNAAYHIIEKKGATYYGVAMSLARITKAIYR    250

BSNT_00541___    251 NENSILTVSTYLDGQYGADDVYIGVPAVVNRGGIAGITELNLNEKEKEQF    300
                     ||.:|||||.:|||::|.:||||||||||.|.|...|.||:||||||:||
BL01703___ldh    251 NEEAILTVSAHLDGEFGENDVYIGVPAVVGRCGAREIVELDLNEKEKQQF    300

BSNT_00541___    301 LHSAGVLKNILKPHFAEQKVN    321
                     .|||||||.||||||..|.  
BL01703___ldh    301 KHSAGVLKAILKPHFELQA--    319


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