Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02401 and BL01605

See DNA alignment / Visit BSNT_02401 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:57
# Commandline: needle
#    -asequence pep-align/BSNT_02401___fruK.1.5803.seq
#    -bsequence pep-align/BL01605___fruK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02401___fruK-BL01605___fruK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02401___fruK-BL01605___fruK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02401___fruK
# 2: BL01605___fruK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     251/303 (82.8%)
# Similarity:   272/303 (89.8%)
# Gaps:           0/303 ( 0.0%)
# Score: 1290.0
# 
#
#=======================================

BSNT_02401___      1 MIYTVTLNPSVDYIVHVEDFTVGGLNRSSYDTKYPGGKGINVSRLLKRHH     50
                     ||||||||||||||||||:|:|||||||.|||||||||||||||:|.|||
BL01605___fru      1 MIYTVTLNPSVDYIVHVEEFSVGGLNRSVYDTKYPGGKGINVSRVLNRHH     50

BSNT_02401___     51 VASKALGFVGGFTGEYIKTFLREENLETAFSEVKGDTRINVKLKTGDETE    100
                     |.||.|||:|||||.|||:||.||.|||||.||.||||||||||||||||
BL01605___fru     51 VPSKVLGFIGGFTGGYIKSFLEEEKLETAFHEVNGDTRINVKLKTGDETE    100

BSNT_02401___    101 INGQGPTISDEDFKAFLEQFQSLQEGDIVVLAGSIPSSLPHDTYEKIAEA    150
                     ||||||.||:|||.|||:||.:::||||||||||||||||.||||||||.
BL01605___fru    101 INGQGPVISEEDFAAFLDQFSAMKEGDIVVLAGSIPSSLPQDTYEKIAEK    150

BSNT_02401___    151 CKQQNARVVLDISGEALLKATEMKPFLMKPNHHELGEMFGTAITSVEEAV    200
                     ||:||.|||:||||||||||.||||.|||||||||||||||.|||.||||
BL01605___fru    151 CKEQNVRVVVDISGEALLKAAEMKPLLMKPNHHELGEMFGTTITSAEEAV    200

BSNT_02401___    201 PYGKKLVEQGAEHVIVSMAGDGALLFTNEAVYFANVPKGKLVNSVGAGDS    250
                     ||||||||:|||:.||||||:||||.|.:.||.|||||||||||||||||
BL01605___fru    201 PYGKKLVERGAENAIVSMAGEGALLCTKDGVYHANVPKGKLVNSVGAGDS    250

BSNT_02401___    251 VVAGFLAGISKQLPLEEAFRLGVTSGSATAFSEELGTEEFVQQLLPEVKV    300
                     |||||||||.|||.::|||||||.|||||||||||||||.|.:|||||:|
BL01605___fru    251 VVAGFLAGIEKQLGIKEAFRLGVASGSATAFSEELGTEELVHKLLPEVQV    300

BSNT_02401___    301 TRL    303
                     ..:
BL01605___fru    301 KAI    303


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.