Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02396 and BL01600
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_02396___yknW.1.5803.seq
# -bsequence pep-align/BL01600___yknW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02396___yknW-BL01600___yknW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02396___yknW-BL01600___yknW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02396___yknW
# 2: BL01600___yknW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity: 106/243 (43.6%)
# Similarity: 141/243 (58.0%)
# Gaps: 29/243 (11.9%)
# Score: 467.0
#
#
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BSNT_02396___ 1 METNVEKNSGTATEK---PSLFGVITSPSVQFERIRERPAVWGPLLIVAA 47
||||:| ||| |||.|:||.|..||||:||:||.|.||:||..
BL01600___ykn 1 METNLE------TEKVKNPSLLGLITRPGEQFERMREKPAFWFPLVIVLI 44
BSNT_02396___ 48 IIIVGAVLQS----LGTDYSELLKSQDTQGLSAEQMETVATITKFGGMAG 93
:.:.||.:.| |.||.||: .|.:...|.. |..|:.|
BL01600___ykn 45 LSVAGAYMLSEKTALSTDLSEM---PDAEAFQAAM--------KGIGIIG 83
BSNT_02396___ 94 AIIGGIAALFIAPLIYWLCVKISGGVTTYKKMLSLGLFVSLISSLGLLVN 143
.|.|.:.||.|:.|||||.|||..|.|.:..|.||.:|...|:::|..:.
BL01600___ykn 84 GIFGFVIALLISALIYWLIVKIGRGTTNFVHMFSLSVFTYFIAAIGQFIG 133
BSNT_02396___ 144 GIVAFTTDVNPLYSTTSLAGIIPSDGALASVLNTFEIFSIWSFVLLAIGL 193
|:|.:.::::|....|||.||||:|..|.|||..|:||:|||..|:|:||
BL01600___ykn 134 GLVIYYSNIDPTIVVTSLNGIIPADEPLKSVLGVFDIFTIWSLSLVALGL 183
BSNT_02396___ 194 HKTGGISKKAGWISAIILFGILVVFSLFSGL----INSVAGA- 231
.|.|||||||.|...||||.|.::.:|..|: .:|..||
BL01600___ykn 184 QKVGGISKKAAWTGVIILFVISILLALIGGMAINFFDSFEGAM 226
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