Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02396 and BL01600

See DNA alignment / Visit BSNT_02396 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence pep-align/BSNT_02396___yknW.1.5803.seq
#    -bsequence pep-align/BL01600___yknW.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02396___yknW-BL01600___yknW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02396___yknW-BL01600___yknW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02396___yknW
# 2: BL01600___yknW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     106/243 (43.6%)
# Similarity:   141/243 (58.0%)
# Gaps:          29/243 (11.9%)
# Score: 467.0
# 
#
#=======================================

BSNT_02396___      1 METNVEKNSGTATEK---PSLFGVITSPSVQFERIRERPAVWGPLLIVAA     47
                     ||||:|      |||   |||.|:||.|..||||:||:||.|.||:||..
BL01600___ykn      1 METNLE------TEKVKNPSLLGLITRPGEQFERMREKPAFWFPLVIVLI     44

BSNT_02396___     48 IIIVGAVLQS----LGTDYSELLKSQDTQGLSAEQMETVATITKFGGMAG     93
                     :.:.||.:.|    |.||.||:   .|.:...|..        |..|:.|
BL01600___ykn     45 LSVAGAYMLSEKTALSTDLSEM---PDAEAFQAAM--------KGIGIIG     83

BSNT_02396___     94 AIIGGIAALFIAPLIYWLCVKISGGVTTYKKMLSLGLFVSLISSLGLLVN    143
                     .|.|.:.||.|:.|||||.|||..|.|.:..|.||.:|...|:::|..:.
BL01600___ykn     84 GIFGFVIALLISALIYWLIVKIGRGTTNFVHMFSLSVFTYFIAAIGQFIG    133

BSNT_02396___    144 GIVAFTTDVNPLYSTTSLAGIIPSDGALASVLNTFEIFSIWSFVLLAIGL    193
                     |:|.:.::::|....|||.||||:|..|.|||..|:||:|||..|:|:||
BL01600___ykn    134 GLVIYYSNIDPTIVVTSLNGIIPADEPLKSVLGVFDIFTIWSLSLVALGL    183

BSNT_02396___    194 HKTGGISKKAGWISAIILFGILVVFSLFSGL----INSVAGA-    231
                     .|.|||||||.|...||||.|.::.:|..|:    .:|..|| 
BL01600___ykn    184 QKVGGISKKAAWTGVIILFVISILLALIGGMAINFFDSFEGAM    226


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