Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04969 and BL01579
See
DNA alignment /
Visit
BSNT_04969 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:09
# Commandline: needle
# -asequence pep-align/BSNT_04969___fhuD.1.5803.seq
# -bsequence pep-align/BL01579___fhuD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04969___fhuD-BL01579___fhuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04969___fhuD-BL01579___fhuD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04969___fhuD
# 2: BL01579___fhuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 315
# Identity: 246/315 (78.1%)
# Similarity: 281/315 (89.2%)
# Gaps: 0/315 ( 0.0%)
# Score: 1324.0
#
#
#=======================================
BSNT_04969___ 1 MTHIYKKLGAAFFALLLIAALAACGNNSESKGSASDSKGAETFTYKAENG 50
|....|.:.||.|.|||||||.||||.:|||.|:|.||..||.|||||||
BL01579___fhu 1 MNIKGKTIAAACFVLLLIAALTACGNQTESKDSSSKSKSEETITYKAENG 50
BSNT_04969___ 51 NVKIPKHPKRVVVMADGYYGYFKTLGINVVGAPENVFKNPYYKGKTDGVE 100
.||:||||||||||||.|:|||||||:||||||:.||||||:|||||||.
BL01579___fhu 51 TVKVPKHPKRVVVMADDYFGYFKTLGLNVVGAPDRVFKNPYFKGKTDGVT 100
BSNT_04969___ 101 NIGDGTSVEKVIDLNPDLIIVWTTQGADIKKLEKIAPTVAVKYDKLDNIE 150
|||:|.|.||||.|.||||:|||||||||:||||||||||:|||.|::.|
BL01579___fhu 101 NIGEGNSAEKVIQLKPDLIVVWTTQGADIEKLEKIAPTVALKYDSLNSTE 150
BSNT_04969___ 151 QLKEFAKMTGTEDKAEKWLAEWDKKVAAAKTKIKKAVGDKTISIMQTNGK 200
:||:|||||||||:||||||||||||||||:|::||||:||:||||||||
BL01579___fhu 151 RLKDFAKMTGTEDQAEKWLAEWDKKVAAAKSKVQKAVGNKTVSIMQTNGK 200
BSNT_04969___ 201 DIYVFGKDFGRGGSIIYKDLGLQATKLTKEKAIDQGPGYTSISLEKLPDF 250
:|:|||..|||||||:|:||||:|||||||||||:|||||||||||||||
BL01579___fhu 201 EIFVFGDQFGRGGSIVYQDLGLKATKLTKEKAIDEGPGYTSISLEKLPDF 250
BSNT_04969___ 251 AGDYIFAGPWQSGGDDGGVFDSSIWKNLNAVKNGHVYKIDPIGFYFTDPI 300
||||||.|||:|.|||..|.::||||||.||||.|||||||:||||:|||
BL01579___fhu 251 AGDYIFIGPWESSGDDSAVLNTSIWKNLGAVKNQHVYKIDPVGFYFSDPI 300
BSNT_04969___ 301 SLEGQLEYITESLTK 315
|||||||:|||:|||
BL01579___fhu 301 SLEGQLEFITENLTK 315
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.