Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03704 and BL01577
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence pep-align/BSNT_03704___yqgU.1.5803.seq
# -bsequence pep-align/BL01577___yqgU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03704___yqgU-BL01577___yqgU.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03704___yqgU-BL01577___yqgU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03704___yqgU
# 2: BL01577___yqgU
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 373
# Identity: 128/373 (34.3%)
# Similarity: 214/373 (57.4%)
# Gaps: 27/373 ( 7.2%)
# Score: 609.0
#
#
#=======================================
BSNT_03704___ 1 MLMRSVCFILLAVLLFSLSACEPSHQQ------------QKQASAAKDEK 38
||....|:.|::..:.:.|.|.||: ::::.||..:|
BL01577___yqg 1 --MRVSLLIIAALMAVAAAGCTPQHQEGSKSVHHEEPEGKRESGAAVKDK 48
BSNT_03704___ 39 KDIIPLSSEKADGAEGWLNNSTILYTASNPT-KTELFAYRIFTGKAKKLY 87
| :|.|.....|...|||:|.|::|||::|. .:|:.:|.||.|..|.:|
BL01577___yqg 49 K-VIALKDRHFDETAGWLDNETVIYTATDPVGGSEIKSYDIFKGTGKTIY 97
BSNT_03704___ 88 QTDGQIVDVQINAREQMILLQIT-HSQKTAVVLLNAEGETLYEKDYETYE 136
:||.:::..::|:.:.|||:|.. :..:..:.|||.:|:.|:.|.:.|:|
BL01577___yqg 98 KTDDRLIASEVNSEKGMILIQTAGNGSEMKLTLLNLQGKQLFAKKFRTHE 147
BSNT_03704___ 137 LEAAWNQYDPYQMMVTEFNENWDFHTYQVNAKKDESFLSPVQVPFIHWTS 186
|:..||::||..:.||.|.::|::.:..::||::::..:..|..||||||
BL01577___yqg 148 LQVDWNRFDPSLLYVTTFTKDWNYESSLIDAKEEQTEKNIAQAAFIHWTS 197
BSNT_03704___ 187 KNTFDYVK-EGRD-DKTGPLYTFDTASKTEQKLEDDVLFFDSFHQMSFTV 234
.:||:|:| ..|| :|..|:|::.||...|:||..|.:..|....|...|
BL01577___yqg 198 ADTFEYIKWNERDREKPAPVYSYSTADGREKKLAGDAVLLDIVGDMRLIV 247
BSNT_03704___ 235 KSASGGK-GTYQFK-TPQSTSPVTAKWPLQAKYTNLAPMEYDYDEAGGLF 282
..:|..: |||.|. ...|...::.|.||.::|.:|:||||.||....||
BL01577___yqg 248 TPSSDQRQGTYIFSDVSSSEKKISFKLPLFSEYGSLSPMEYGYDPRHELF 297
BSNT_03704___ 283 YTFK--QSGDAYKLAAINVASGETKDLVSLREMEPIQISPNGKYALYGFH 330
||:: :||..|.|.::|:.||:.:.:....||.||.:||:|.|||||:.
BL01577___yqg 298 YTYQPNESGSLYDLISVNLKSGKREVIREKVEMLPITLSPDGDYALYGYT 347
BSNT_03704___ 331 FEQIILLKSHETKQLIIDQKEME 353
.:|||.|.|.....|:..:
BL01577___yqg 348 QDQIISLNSKTAAPLVTKE---- 366
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