Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03698 and BL01574

See DNA alignment / Visit BSNT_03698 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:43
# Commandline: needle
#    -asequence pep-align/BSNT_03698___yqgZ.1.5803.seq
#    -bsequence pep-align/BL01574.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03698___yqgZ-BL01574.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03698___yqgZ-BL01574.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03698___yqgZ
# 2: BL01574
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:      98/127 (77.2%)
# Similarity:   115/127 (90.6%)
# Gaps:           3/127 ( 2.4%)
# Score: 518.0
# 
#
#=======================================

BSNT_03698___      1 MEQQLTFYSYPSCTSCRKTKHWLKAHQIEFNERHLFRETPTREELKYILS     50
                      .::|||||||||||||||||||||:|::|.|||||||||.::|||:|||
BL01574            1 -MEELTFYSYPSCTSCRKTKHWLKANQVDFTERHLFRETPNQDELKHILS     49

BSNT_03698___     51 LTTEGIDEILATRSQTFKNLNLNIEEMTVNEVLELLIEKPKLLRRPILVD    100
                     |||||||||||||||.||.|||:|||:||:|||||||:|||||||||:|:
BL01574           50 LTTEGIDEILATRSQAFKELNLDIEELTVSEVLELLIQKPKLLRRPIIVN     99

BSNT_03698___    101 NKKLVIGYNPGELLKLSKKKTVHQSA-    126
                     ..|||:|||||||||| ||.|:|:|. 
BL01574          100 GDKLVVGYNPGELLKL-KKHTLHRSVS    125


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.