Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03685 and BL01571

See DNA alignment / Visit BSNT_03685 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence pep-align/BSNT_03685___comGB.1.5803.seq
#    -bsequence pep-align/BL01571___comGB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03685___comGB-BL01571___comGB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03685___comGB-BL01571___comGB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03685___comGB
# 2: BL01571___comGB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 344
# Identity:     184/344 (53.5%)
# Similarity:   246/344 (71.5%)
# Gaps:          21/344 ( 6.1%)
# Score: 972.0
# 
#
#=======================================

BSNT_03685___      1 ---------------------MTAGGYTLLDGLRLMELQMNKRQAADLTG     29
                                          |...|||:||.|.:::||:|:|:.||||.
BL01571___com      1 MKIKMKWPVREQADLLKKLGDMMQSGYTILDALSMLKLQLNERRRADLTF     50

BSNT_03685___     30 SVTCLREGAPFYQVLKSLSFHKEAVGICYFAETHGELPASMIQSGELLER     79
                     ::..|.||.|.:|||:.:||||:||.|.||||.||.||.:..||||||.|
BL01571___com     51 AMEKLTEGCPVFQVLEMISFHKDAVTIVYFAEQHGNLPFAFRQSGELLHR    100

BSNT_03685___     80 KIAQADQLKSVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSR    129
                     ||||:::||...||||||:.||.|:..:::|.|:||||.||:|||:|||.
BL01571___com    101 KIAQSEKLKKAARYPLFLVLTVCVIISIMKSAIVPQFSAIYESMNVETSF    150

BSNT_03685___    130 STDMLFAFFQHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIP    179
                     :|.::|..|.|..|....|.|..|.:.:||...|:.|.|..:|...|.||
BL01571___com    151 ATTLIFYVFDHFYLFFAGLPLVAAALSLYYLCSFRHKPPEDKMAFLITIP    200

BSNT_03685___    180 LVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQTFLPFYRCEAEQ    229
                     |:|:..|||||||.|||||:||::|||:||||.||:.|.||.|::.||::
BL01571___com    201 LLGQTFKLFNSYFLSLQLSNLLQAGLSVYDSLKAFESQPFLRFHKNEAKR    250

BSNT_03685___    230 LIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFIL    279
                     ||||||.|||:|..:.|.||||.||:|.::||||:|.|.|||::||||::
BL01571___com    251 LIERLKQGESLEQMLAGHPFYENDLAKAVAHGQLNGHLYRELYSYSQFLI    300

BSNT_03685___    280 QRLEHKAQKWTGILQPMIYGFVAAMILLVYLSMLVPMYQMMNQM    323
                     :|||.||:||||::||:|||..|||||::|||||:||||||||:
BL01571___com    301 ERLERKAEKWTGLIQPLIYGLTAAMILILYLSMLLPMYQMMNQL    344


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