Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03673 and BL01565

See DNA alignment / Visit BSNT_03673 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence pep-align/BSNT_03673___yqxM.1.5803.seq
#    -bsequence pep-align/BL01565___yqxM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03673___yqxM-BL01565___yqxM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03673___yqxM-BL01565___yqxM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03673___yqxM
# 2: BL01565___yqxM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 259
# Identity:     102/259 (39.4%)
# Similarity:   149/259 (57.5%)
# Gaps:          23/259 ( 8.9%)
# Score: 485.5
# 
#
#=======================================

BSNT_03673___      1 MFRLFYNQQKAKTKLKVLLIFQLSVIFSLTAAICLQFSDDTSAAFHDIET     50
                     ||||...::..|...|.:::||..:|..|...:..|.|..|:|:|||:||
BL01565___yqx      1 MFRLSRTRRCRKRAGKNIIVFQTLLIIYLLIGLGSQLSQHTNASFHDVET     50

BSNT_03673___     51 FDVSLQTCKDFQHTDKNCHYDKRWDQSDLHISDQTDTKGTVCSPFALFAV    100
                     :.::::....|...      :|:||.|||.:..||.||||||:|..|||.
BL01565___yqx     51 YSMTMKAASTFPQD------EKQWDGSDLKLQKQTKTKGTVCAPLTLFAE     94

BSNT_03673___    101 LENTGEKLKKSKWKWELHKLENARKPLKDGNVIEKGFVSNQIGDSLYKIE    150
                     .:|.|.::..|:||||||||.:::|||:||.||:||....:...|:|:||
BL01565___yqx     95 YKNRGSQIADSEWKWELHKLGHSKKPLEDGTVIDKGVFKKEAESSIYRIE    144

BSNT_03673___    151 TKKKMKPGIYAFKVYKPAGYP--ANGSTFEWSEPMTLAKCDEK-PTVPKK    197
                     :|:..|.|:||||:.:|.|:|  ..|..|.||..|.|..|:|: |..|||
BL01565___yqx    145 SKRAAKGGLYAFKLIRPEGHPDVKKGKPFIWSNVMELQDCNEETPKPPKK    194

BSNT_03673___    198 -ETKSDVKKENETTQKDIQ--EKTMKEETSQEAVTKENETQSDQKESGEE    244
                      ..|....::.:||||..|  |:|.|:   .|:|.|||..:.:..||||.
BL01565___yqx    195 ASAKPKQTEQTQTTQKSEQDIEETPKD---SESVDKENRKEDNSLESGEA    241

BSNT_03673___    245 DEKSNEADQ    253
                     .        
BL01565___yqx    242 S--------    242


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