Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00530 and BL01556

See DNA alignment / Visit BSNT_00530 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:09
# Commandline: needle
#    -asequence pep-align/BSNT_00530___opuAC.1.5803.seq
#    -bsequence pep-align/BL01556___opuAC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00530___opuAC-BL01556___opuAC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00530___opuAC-BL01556___opuAC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00530___opuAC
# 2: BL01556___opuAC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 294
# Identity:     210/294 (71.4%)
# Similarity:   245/294 (83.3%)
# Gaps:           1/294 ( 0.3%)
# Score: 1138.0
# 
#
#=======================================

BSNT_00530___      1 MLKKIIGIGVSAMLALSLAACG-SENEKNASAAEQVNKTIIGIDPGSGIM     49
                     |.|||.|||.:|:|.|.||||| |.|.:|||..:|||..|.|||||:|||
BL01556___opu      1 MWKKIAGIGTAAVLTLGLAACGSSNNNENASVGDQVNYKITGIDPGAGIM     50

BSNT_00530___     50 SLTDKAMKDYDLNDWTLISASSAAMTATLKKSYDRKKPIIITGWTPHWMF     99
                     :.||:|:|||||:.||:.|.||:||||.|||:||:|.|||||||||||||
BL01556___opu     51 NATDQALKDYDLSKWTVTSGSSSAMTAALKKAYDKKDPIIITGWTPHWMF    100

BSNT_00530___    100 SRYKLKYLDDPKQSYGSAEEIHTITRKGFSKEQPNAAKLLSQFKWTQDEM    149
                     ::|.||||.|||.|||.||||||:|||||..:.|.|.||||||.||:|:|
BL01556___opu    101 AKYDLKYLKDPKGSYGDAEEIHTVTRKGFKDDHPGANKLLSQFSWTEDDM    150

BSNT_00530___    150 GEIMIKVEEGEKPAKVAAEYVNKHKDQIAEWTKGVQKVKGDKINLAYVAW    199
                     ||:|:.|:||:||.:.||::|.||:|.:.:|||||.|..|:||.|.||||
BL01556___opu    151 GEVMLAVQEGKKPEEAAADFVKKHQDLVKKWTKGVDKADGEKIKLGYVAW    200

BSNT_00530___    200 DSEIASTNVIGKVLEDLGYEVTLTQVEAGPMWTAIATGSADASLSAWLPN    249
                     ||||||||||.||||||||.|||:|||||||||.||.||.||||:||||.
BL01556___opu    201 DSEIASTNVIAKVLEDLGYNVTLSQVEAGPMWTGIANGSVDASLAAWLPQ    250

BSNT_00530___    250 THKAYAAKYKGKYDDIGTSMTGVKMGLVVPQYMKNVNSIEDLKK    293
                     |||.||.||||||:||||||||||:|||||.|||:|||||||||
BL01556___opu    251 THKTYAEKYKGKYEDIGTSMTGVKIGLVVPTYMKDVNSIEDLKK    294


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.