Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03645 and BL01537

See DNA alignment / Visit BSNT_03645 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence pep-align/BSNT_03645___spoIIIAD.1.5803.seq
#    -bsequence pep-align/BL01537___spoIIIAD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03645___spoIIIAD-BL01537___spoIIIAD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03645___spoIIIAD-BL01537___spoIIIAD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03645___spoIIIAD
# 2: BL01537___spoIIIAD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 133
# Identity:     112/133 (84.2%)
# Similarity:   119/133 (89.5%)
# Gaps:          12/133 ( 9.0%)
# Score: 550.0
# 
#
#=======================================

BSNT_03645___      1 MQIDIVQIVGLGLIATFLSLIVKEQKPTFAFLIVVFAGCAIFLYLVDQIY     50
                                 :||||||||||||||||||||||||||.|||:||||:|
BL01537___spo      1 ------------MIATFLSLIVKEQKPTFAFLIVVFAGCTIFLFLVDQVY     38

BSNT_03645___     51 DIIRMIEKIAINANVNMVYVETILKIIGIAYIAEFGAQLTKDAGQGAIAS    100
                     :|||||||||.|||:||:||||||||||||||||||||||||||||||||
BL01537___spo     39 EIIRMIEKIAANANINMMYVETILKIIGIAYIAEFGAQLTKDAGQGAIAS     88

BSNT_03645___    101 KIELAGKILILVMAVPILTVIIETILGLIPSMS    133
                     |||||||||||||||||||||||||:|||||||
BL01537___spo     89 KIELAGKILILVMAVPILTVIIETIIGLIPSMS    121


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.