Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03638 and BL01533

See DNA alignment / Visit BSNT_03638 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence pep-align/BSNT_03638___spoIIIAH.1.5803.seq
#    -bsequence pep-align/BL01533___spoIIIAH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03638___spoIIIAH-BL01533___spoIIIAH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03638___spoIIIAH-BL01533___spoIIIAH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03638___spoIIIAH
# 2: BL01533___spoIIIAH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity:     140/221 (63.3%)
# Similarity:   168/221 (76.0%)
# Gaps:          12/221 ( 5.4%)
# Score: 657.0
# 
#
#=======================================

BSNT_03638___      1 -MLKKQTVWLLTMLSLVVVLSVYYIMSPESKNAVQMQSEKSASDSGEVAT     49
                      ||||||||||||||||||||||||||||.:|.|      :..|..:||.
BL01533___spo      1 MMLKKQTVWLLTMLSLVVVLSVYYIMSPEGENVV------TVDDKEQVAA     44

BSNT_03638___     50 EKAPAKQDTKEKSGTETEKGKEDGTKGTKDSSADKETSAEASEKGTVVTE     99
                     ||....::...|.|.:.....:|.||| ||:. |||||| :.:.|.||||
BL01533___spo     45 EKEKPMKEEPAKDGKDDTAPAKDKTKG-KDTK-DKETSA-SEQNGEVVTE     91

BSNT_03638___    100 --TADDDLFTTYRLDLEDARSKEREELNAIVSSDDATAKEKSEAYDKMTA    147
                       :.|:|||||||::::|.||:|||||..||.||.||||||||||||||.
BL01533___spo     92 ESSGDEDLFTTYRMEMDDQRSREREELTEIVRSDKATAKEKSEAYDKMTE    141

BSNT_03638___    148 LSEVEGTEKQLETLIKTQGYEDALVNAEGDKINITVKSDKHSKSKATAII    197
                     |||.|||||.|||||||:||:||||||:|||:|||||:.:|||:.||.||
BL01533___spo    142 LSEAEGTEKTLETLIKTKGYKDALVNADGDKVNITVKAKEHSKAAATDII    191

BSNT_03638___    198 DLVAKEIKTMKDVAVTFEPSK    218
                     |:||||:|.:.||||||||:.
BL01533___spo    192 DIVAKEVKNLNDVAVTFEPAD    212


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