Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03638 and BL01533
See
DNA alignment /
Visit
BSNT_03638 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence pep-align/BSNT_03638___spoIIIAH.1.5803.seq
# -bsequence pep-align/BL01533___spoIIIAH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03638___spoIIIAH-BL01533___spoIIIAH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03638___spoIIIAH-BL01533___spoIIIAH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03638___spoIIIAH
# 2: BL01533___spoIIIAH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 221
# Identity: 140/221 (63.3%)
# Similarity: 168/221 (76.0%)
# Gaps: 12/221 ( 5.4%)
# Score: 657.0
#
#
#=======================================
BSNT_03638___ 1 -MLKKQTVWLLTMLSLVVVLSVYYIMSPESKNAVQMQSEKSASDSGEVAT 49
||||||||||||||||||||||||||||.:|.| :..|..:||.
BL01533___spo 1 MMLKKQTVWLLTMLSLVVVLSVYYIMSPEGENVV------TVDDKEQVAA 44
BSNT_03638___ 50 EKAPAKQDTKEKSGTETEKGKEDGTKGTKDSSADKETSAEASEKGTVVTE 99
||....::...|.|.:.....:|.||| ||:. |||||| :.:.|.||||
BL01533___spo 45 EKEKPMKEEPAKDGKDDTAPAKDKTKG-KDTK-DKETSA-SEQNGEVVTE 91
BSNT_03638___ 100 --TADDDLFTTYRLDLEDARSKEREELNAIVSSDDATAKEKSEAYDKMTA 147
:.|:|||||||::::|.||:|||||..||.||.||||||||||||||.
BL01533___spo 92 ESSGDEDLFTTYRMEMDDQRSREREELTEIVRSDKATAKEKSEAYDKMTE 141
BSNT_03638___ 148 LSEVEGTEKQLETLIKTQGYEDALVNAEGDKINITVKSDKHSKSKATAII 197
|||.|||||.|||||||:||:||||||:|||:|||||:.:|||:.||.||
BL01533___spo 142 LSEAEGTEKTLETLIKTKGYKDALVNADGDKVNITVKAKEHSKAAATDII 191
BSNT_03638___ 198 DLVAKEIKTMKDVAVTFEPSK 218
|:||||:|.:.||||||||:.
BL01533___spo 192 DIVAKEVKNLNDVAVTFEPAD 212
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.