Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03585 and BL01500

See DNA alignment / Visit BSNT_03585 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence pep-align/BSNT_03585___ptb.1.5803.seq
#    -bsequence pep-align/BL01500___ptb.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03585___ptb-BL01500___ptb.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03585___ptb-BL01500___ptb.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03585___ptb
# 2: BL01500___ptb
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     198/304 (65.1%)
# Similarity:   242/304 (79.6%)
# Gaps:           6/304 ( 2.0%)
# Score: 964.5
# 
#
#=======================================

BSNT_03585___      1 MKLKDLIGKASMHKNKTIAVAHAEDEEVIRAVKLAAEHLSARFLLTGDST     50
                     ||||.|:.||:...|||:|||||||:||::|||||.:...|||||.|...
BL01500___ptb      1 MKLKQLLQKAAELDNKTVAVAHAEDDEVLQAVKLAVDKQFARFLLIGHRE     50

BSNT_03585___     51 KLNELTS--SMQGHQVEIVHADTPEESAKLAVRAVHHKTADVLMKGNVPT     98
                     ||..:.:  ::....|:|:|:::|.:||::||:||....|||||||||||
BL01500___ptb     51 KLRHMMTEQNISKRHVDIIHSESPADSARIAVQAVKSGNADVLMKGNVPT    100

BSNT_03585___     99 SVLLKAVLNRQEGLRSSSVLSHVAVFDIPDFDRLMFVTDSAMNIAPSLEE    148
                     :||||||||::.|||||.||||||.|::..|:||::|||:||||:|.|:|
BL01500___ptb    101 AVLLKAVLNKEYGLRSSHVLSHVAAFEVSGFERLIYVTDAAMNISPKLDE    150

BSNT_03585___    149 LRQILQNAVHVAHAVGNNMPKAAALAAVETVNPKMEATVNAAALAQMYKR    198
                     |:|||:|||.||.:||..|||.|.|||||||||.||||:|||||.||..|
BL01500___ptb    151 LKQILENAVGVARSVGVQMPKVACLAAVETVNPAMEATLNAAALTQMNHR    200

BSNT_03585___    199 GQIKGCIVDGPLALDNAVSQIAAAQKKISGDVAGNADILLVPTIEAGNIL    248
                     ||||.|:||||||||||:|.:||..|.|||.|||.|||||||:||.||:|
BL01500___ptb    201 GQIKNCVVDGPLALDNAISPLAARHKNISGIVAGEADILLVPSIETGNVL    250

BSNT_03585___    249 YKSLIYFAKASVAAVITGAKAPIALTSRADSAENKLYSIALAICASEEYT    298
                     |||||:||.|.|.|::.|||||||||||||||||||||||||:|.||. .
BL01500___ptb    251 YKSLIHFAGAKVGAILAGAKAPIALTSRADSAENKLYSIALALCTSEA-R    299

BSNT_03585___    299 H---    299
                     |   
BL01500___ptb    300 HEEE    303


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