Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03157 and BL01449
See
DNA alignment /
Visit
BSNT_03157 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence pep-align/BSNT_03157___yojM.1.5803.seq
# -bsequence pep-align/BL01449___yojM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03157___yojM-BL01449___yojM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03157___yojM-BL01449___yojM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03157___yojM
# 2: BL01449___yojM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 200
# Identity: 113/200 (56.5%)
# Similarity: 135/200 (67.5%)
# Gaps: 7/200 ( 3.5%)
# Score: 547.0
#
#
#=======================================
BSNT_03157___ 1 ---MHRLLLLMMLTALGVAGCGQKKPPDPPNRVPE-KKVVETSAFGHHVQ 46
:|.:||..|...| .|.|.|:|..:..|...| |:..||......|.
BL01449___yoj 1 MRTLHYILLACMSVCL-AAACTQQKEIEQKNAEQEHKETFETMTQPLKVP 49
BSNT_03157___ 47 LVNREGKAVGFIEIKESDDEGLDIHISANSLRPGASLGFHIYEKGSCVRP 96
|:.|:|...||||:.||..|||||.:||:.|.|| .|.|||:|.|.|.:|
BL01449___yoj 50 LIKRDGTETGFIEVYESAAEGLDIRVSAHDLPPG-MLAFHIHETGVCKKP 98
BSNT_03157___ 97 DFESAGGPFNPLNKEHGFNNPMGHHAGDLPNLEVGADGKVDVIMNAPDTS 146
||||||..|||..||||||||.|.|||||||:|||||||||||:|||..:
BL01449___yoj 99 DFESAGAHFNPDQKEHGFNNPKGPHAGDLPNIEVGADGKVDVIVNAPAVT 148
BSNT_03157___ 147 LKKGSKLNILDEDGSAFIIHEQADDYLTNPSGNSGARIVCGALLGNNEKQ 196
|.:.|:.::||.|||||||||..||.|||||||||||:|||||..:.:|
BL01449___yoj 149 LDQKSRFSLLDHDGSAFIIHEHQDDDLTNPSGNSGARMVCGALTNSGKK- 197
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.