Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04501 and BL01417
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence pep-align/BSNT_04501___glgD.1.5803.seq
# -bsequence pep-align/BL01417___glgD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04501___glgD-BL01417___glgD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04501___glgD-BL01417___glgD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04501___glgD
# 2: BL01417___glgD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 343
# Identity: 209/343 (60.9%)
# Similarity: 265/343 (77.3%)
# Gaps: 1/343 ( 0.3%)
# Score: 1128.0
#
#
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BSNT_04501___ 1 MFNNQMLGVIDETTYKHSLQDLTAQRSLGAIPFAGRYRLIDFMLSNMVNA 50
.||||||:||....:||||||||.||:||:|||||||||||.||.||:|
BL01417___glg 1 -MNNQMLGIIDAAVNQHSLQDLTAGRSIGAVPFAGRYRLIDFALSGMVHA 49
BSNT_04501___ 51 DIRSVAIFPKYRYRSLMDHLGAGKEWDLHRKKDGLFFFPSPHLHHEYDEF 100
.|||||:|.|..|||||||||:||||||:||::||||.||...|.|:...
BL01417___glg 50 GIRSVAVFSKSPYRSLMDHLGSGKEWDLNRKREGLFFLPSSLPHDEHVGL 99
BSNT_04501___ 101 GSFRQFSDHLDYFHRSTQQYAVISNSHTVCNIQFQYVLKRHQEVGCDVTE 150
||||||::|||||.||||||||::||:||.:|.||.|||:|.|.|||:||
BL01417___glg 100 GSFRQFAEHLDYFQRSTQQYAVVANSYTVGHIPFQEVLKQHLESGCDLTE 149
BSNT_04501___ 151 VFQDGQSLQIYIMSTTLLKDLIYGHSEKGYKTIQEAVEKESSALTICPYE 200
:..:|:.|.:|:...:||.:::.||..:|.::.:|...||..:|::..||
BL01417___glg 150 ICHEGKPLGMYVTKKSLLWEMVEGHCPEGAQSFEEVCRKERGSLSVNSYE 199
BSNT_04501___ 201 YSGYAAVIDSVEKYYTHSMELIQPRFWQQVFLPQQPIYTKVKDEPPTKYG 250
:|||.|||||.|.|..||:.||||.||:|||...||:|||:|::||.||.
BL01417___glg 200 HSGYTAVIDSPESYLFHSLNLIQPVFWEQVFHMGQPVYTKIKNDPPVKYA 249
BSNT_04501___ 251 KHSTVKNSLVANGCVLEGEVENCILFRAVHVGKGTKLKNCIIMQKTQIGE 300
|:|.||.|::|||||:||||||.:|||.|||||||.:||.::||||:|||
BL01417___glg 250 KNSRVKQSIIANGCVIEGEVENSVLFRGVHVGKGTTIKNSVVMQKTRIGE 299
BSNT_04501___ 301 DCLLEQVISDKDVKIGKATEAAGTAEQPLVLRKGLVQGELMNS 343
:|.||.||.|||||||...|.:||...|.:|:||.:||.||||
BL01417___glg 300 NCRLEHVICDKDVKIGHHIEMSGTMSLPFILKKGAIQGALMNS 342
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