Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02056 and BL01407

See DNA alignment / Visit BSNT_02056 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence pep-align/BSNT_02056___yjfB.1.5803.seq
#    -bsequence pep-align/BL01407.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02056___yjfB-BL01407.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02056___yjfB-BL01407.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02056___yjfB
# 2: BL01407
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 57
# Identity:      31/57 (54.4%)
# Similarity:    40/57 (70.2%)
# Gaps:           2/57 ( 3.5%)
# Score: 142.5
# 
#
#=======================================

BSNT_02056___      1 MDIPALSVAMHQASLAQNVNIALTKKMLDTAQQNADQTLKMIQ--HPTLG     48
                     |||..||:||.||:|.|||.::|||..||||:|:|.|.:.|:|  ||..|
BL01407            1 MDIAVLSMAMSQAALYQNVQMSLTKTALDTAEQSAQQLVDMVQAPHPVSG     50

BSNT_02056___     49 QTIDVKA     55
                     ..||:|.
BL01407           51 HHIDLKG     57


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