Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06212 and BL01376

See DNA alignment / Visit BSNT_06212 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence pep-align/BSNT_06212___dnaC.1.5803.seq
#    -bsequence pep-align/BL01376___dnaC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06212___dnaC-BL01376___dnaC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06212___dnaC-BL01376___dnaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06212___dnaC
# 2: BL01376___dnaC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 454
# Identity:     439/454 (96.7%)
# Similarity:   450/454 (99.1%)
# Gaps:           0/454 ( 0.0%)
# Score: 2205.0
# 
#
#=======================================

BSNT_06212___      1 MTDLLNDRLPPQNIEAEQAVLGAIFLQPSALTLASEVLIPDDFYRMSHQK     50
                     |||||||||||||||||||||||:||:|||||||||||||||||||||||
BL01376___dna      1 MTDLLNDRLPPQNIEAEQAVLGAVFLEPSALTLASEVLIPDDFYRMSHQK     50

BSNT_06212___     51 IYNAMLVLGDRGEPVDLVTVTSELANTDLLEEVGGISYLTDIANSVPTAA    100
                     |:||||||||||||||||||||||||||||||||||||||||||||||||
BL01376___dna     51 IFNAMLVLGDRGEPVDLVTVTSELANTDLLEEVGGISYLTDIANSVPTAA    100

BSNT_06212___    101 NIEYYAKIVEEKSILRRLIRTATTIAQDGYTREDEVEDLLSEAEKTIMEV    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01376___dna    101 NIEYYAKIVEEKSILRRLIRTATTIAQDGYTREDEVEDLLSEAEKTIMEV    150

BSNT_06212___    151 AQRKNTSAFQNIKDVLVQTYDNIEQLHNRKGDITGIPTGFTELDRMTAGF    200
                     |||||:.|||||||||||||||||||||||||||||||||||||||||||
BL01376___dna    151 AQRKNSGAFQNIKDVLVQTYDNIEQLHNRKGDITGIPTGFTELDRMTAGF    200

BSNT_06212___    201 QRNDLIIVAARPSVGKTAFALNIAQNVATKTDESVAIFSLEMGAEQLVMR    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01376___dna    201 QRNDLIIVAARPSVGKTAFALNIAQNVATKTDESVAIFSLEMGAEQLVMR    250

BSNT_06212___    251 MLCAEGNINAQNLRTGNLTEEDWGKLTMAMGSLSNSGIYIDDTPGIRVSE    300
                     ||||||||||||||||||||||||||||||||||||||:|||||||||||
BL01376___dna    251 MLCAEGNINAQNLRTGNLTEEDWGKLTMAMGSLSNSGIFIDDTPGIRVSE    300

BSNT_06212___    301 IRAKCRRLKQESGLGMILIDYLQLIQGSGRSKDNRQQEVSEISRELKSIA    350
                     ||:||||||||:|||||||||||||||||||.||||||||||||.||::|
BL01376___dna    301 IRSKCRRLKQENGLGMILIDYLQLIQGSGRSSDNRQQEVSEISRALKALA    350

BSNT_06212___    351 RELQVPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDD    400
                     |||:||||||||||||||||||||||||||||||||||||||||||||||
BL01376___dna    351 RELEVPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDD    400

BSNT_06212___    401 YYDKETENKNIIEIIIAKQRNGPVGTVSLAFVKEYNKFVNLERRFDDAGV    450
                     |||||:||||||||||||||||||||||||||||||||||||||||||||
BL01376___dna    401 YYDKESENKNIIEIIIAKQRNGPVGTVSLAFVKEYNKFVNLERRFDDAGV    450

BSNT_06212___    451 PPGA    454
                     .|||
BL01376___dna    451 APGA    454


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