Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01834 and BL01345

See DNA alignment / Visit BSNT_01834 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:20
# Commandline: needle
#    -asequence pep-align/BSNT_01834___yisK.1.5803.seq
#    -bsequence pep-align/BL01345___yisK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01834___yisK-BL01345___yisK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01834___yisK-BL01345___yisK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01834___yisK
# 2: BL01345___yisK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity:     227/302 (75.2%)
# Similarity:   260/302 (86.1%)
# Gaps:           2/302 ( 0.7%)
# Score: 1185.0
# 
#
#=======================================

BSNT_01834___      1 MKFATGELYNRMFVGLIIDDEKIMDLQKAEKKLFELETIPGSLIECIAEG     50
                     |||||.:|::|.||||:: |||||||||||||||||||||.:||||::||
BL01345___yis      1 MKFATAKLHSRTFVGLVM-DEKIMDLQKAEKKLFELETIPETLIECVSEG     49

BSNT_01834___     51 DKFVAHARQLAEWAKKPN-DELGSFMYSLSEVKLHAPIPKPSKNIICIGK     99
                     :|||.|..||.||:||.| :|.||::|.||:|.|.||||:|.||:|||||
BL01345___yis     50 EKFVRHVEQLVEWSKKKNSEESGSYIYPLSDVDLLAPIPEPRKNVICIGK     99

BSNT_01834___    100 NYRDHAIEMGSEADIPEHPMVFTKSPVTVTGHGDIVKSHEEVTSQLDYEG    149
                     ||||||||||||||||||.|||||:|.:|.||.:.:.:||.||..|||||
BL01345___yis    100 NYRDHAIEMGSEADIPEHIMVFTKAPTSVIGHMEGIDAHEGVTEALDYEG    149

BSNT_01834___    150 ELAVVIGKSGTRISKEDAYDHVFGYTIVNDITARDLQKRHKQFFIGKSLD    199
                     ||||||||:|..|.|.:|.|:||||||:||:|||||||||||||||||||
BL01345___yis    150 ELAVVIGKTGKNIPKAEALDYVFGYTIINDVTARDLQKRHKQFFIGKSLD    199

BSNT_01834___    200 TTCPMGPVLVHKSSIQEPERLKVETRVNGELRQSGSASDMIFSIPELIET    249
                     .||||||.|||||.|::|..||||||||||||||||..||||.|.|:|||
BL01345___yis    200 ATCPMGPFLVHKSMIEDPGDLKVETRVNGELRQSGSTKDMIFPIAEMIET    249

BSNT_01834___    250 LSKGMTLEAGDIIATGTPSGVGKGFTPPKFLRSGDKIDITIDPIGTLSNQ    299
                     |||||||||||||||||||||||||.||||||.||::||||:|||||||.
BL01345___yis    250 LSKGMTLEAGDIIATGTPSGVGKGFNPPKFLRKGDQVDITIEPIGTLSNP    299

BSNT_01834___    300 IG    301
                     :.
BL01345___yis    300 VK    301


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