Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00924 and BL01335
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:28
# Commandline: needle
# -asequence pep-align/BSNT_00924.1.5803.seq
# -bsequence pep-align/BL01335.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00924-BL01335.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00924-BL01335.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00924
# 2: BL01335
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 512
# Identity: 148/512 (28.9%)
# Similarity: 246/512 (48.0%)
# Gaps: 41/512 ( 8.0%)
# Score: 491.5
#
#
#=======================================
BSNT_00924 1 MELSFLPKNTFIDPNGHNTNE-VKSLVDQLAGLV-----------IEHSS 38
|:.|...|| |.....||..: :|:..|.:...| ..:|.
BL01335 1 MKQSSKQKN-FDSLFMHNGEQGIKAYRDAVETAVETLWADWKNKSKPYSG 49
BSNT_00924 39 HAAKRDTLPAVESFDYSDIPETGIEIENILVNL-QGIIKNSMNPQNPRYM 87
...|...|.....|.:. |.|..:.::|.:| :..:.:.::.::|:..
BL01335 50 KMPKELDLEIKSLFSFQ---EAGESLADVLEHLKEAYLPHRIHVEDPKCA 96
BSNT_00924 88 GHMDSIPTLISCLGDFISSSLNNNMLSLEMSPVFSKVEAQLLKTIARMFG 137
.|:...|.:.:...:.:.|.||.:|.|.:.|...|.:|.::::.:.|.|.
BL01335 97 AHLHCPPLIPALAAEMLISVLNQSMDSFDQSGAASLIEEEMVQWLCRKFE 146
BSNT_00924 138 YDDKSGGVMTSGGSLANLHALTVARN------HQLNMKKTGIFGLSGQPV 181
|...:.|..||||:.:|...|.:||: ...|::|.|:...:.:..
BL01335 147 YGKDADGTFTSGGTQSNYMGLLLARDAFCEKQWNWNVQKDGLPPEANRLR 196
BSNT_00924 182 IFVSDVSHTSLHKAAMILGLGTSSIIPVKSNNLARMDIHDLEIKIHRAKS 231
|..|..:|.::.|:|..||||..:::.|.::...||.::||:.|....|.
BL01335 197 ILCSKDAHFTVKKSASQLGLGERAVVLVDTDAEKRMSLYDLKQKTAMLKE 246
BSNT_00924 232 EGHIPFAVVATAGTTVTGSIDPILPIARITKENGLWLHVDAAYGGALIFS 281
.|..|||:|||.|||..|||||:..:|......|||.|||||||||||.|
BL01335 247 SGLHPFAIVATCGTTDFGSIDPLSELADAAHAGGLWFHVDAAYGGALILS 296
BSNT_00924 282 EKYRDKLSGIEMADSITFNPQKWMYITKTCAMTLFKNREILETDFRI--- 328
...|.||:||:.||||:.:..|..|...:|...|.|:|. .||:
BL01335 297 RTRRYKLAGIDRADSISVDFHKQFYQPVSCGAFLVKDRR----HFRLIDY 342
BSNT_00924 329 SAPYMN-ETD----FINLGELGVQGTRHADILKLYLSLQHVGTKGYNQLI 373
.|.|:| |.| .::|....:|.||..|.|||::||:.:|...:.::|
BL01335 343 HADYLNPEEDEAEGIVHLVNKSIQTTRRFDALKLFVSLRVLGEDTFAEMI 392
BSNT_00924 374 NKSFALNEECIEQVKQRPFLELY-CEPDTNICCFRGIPHDIEKDQWDNWN 422
:.:|||.|...|::......||. ..|:.|...||.:..:.:.:. |..|
BL01335 393 DWTFALAEAAAEKISASDRFELLNPHPELNAVVFRCLASEDDAEN-DRLN 441
BSNT_00924 423 LELQQFLLKEENIFLSLPEWKGNRWLRAVFLNPFITGSLIKQMFRKIDQ- 471
..:.:.|.:.....::.....|..:|:...|||..|.|.:..:..:|.:
BL01335 442 KCIHRELFRTGQAVIAKTAAAGKTYLKFTLLNPRTTLSDLDDILGRIQEL 491
BSNT_00924 472 --FYDQYKQIV- 480
.|...:::.
BL01335 492 ASLYTNSRRVTG 503
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