Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01059 and BL01299
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence pep-align/BSNT_01059.1.5803.seq
# -bsequence pep-align/BL01299___pspA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01059-BL01299___pspA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01059-BL01299___pspA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01059
# 2: BL01299___pspA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 73/226 (32.3%)
# Similarity: 90/226 (39.8%)
# Gaps: 124/226 (54.9%)
# Score: 374.0
#
#
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BSNT_01059 1 MSIIGRFKDIMSANINALLDKAENPEKMADQYLRNMNSDLAKVKAETAAV 50
|||:.||||||::|||||||||||.|||.|||:||:||||.|||||||:|
BL01299___psp 1 MSILSRFKDIMASNINALLDKAENTEKMVDQYVRNLNSDLNKVKAETASV 50
BSNT_01059 51 MAEEQRAKREYHECQADMEKMESYAMKALQAGNESDARKFLERKTPLESK 100
||.|||||||..:|:|:::|:|.||||||:||:|:|||.|||:|..||:|
BL01299___psp 51 MAAEQRAKRELADCRAEIDKLERYAMKALEAGSEADARTFLEKKAVLETK 100
BSNT_01059 101 LS------------------------------------------------ 102
.|
BL01299___psp 101 ASELETAFQTASSNANQMKKMHDKLVSDIGELEARRAAIKAKWTAAKTQE 150
BSNT_01059 102 -------------------------------------------------- 102
BL01299___psp 151 RMNKLGASAANANHSMSAFGRMEEKANRALDEANAMAELNAAPQDDIEDL 200
BSNT_01059 102 -------------------------- 102
BL01299___psp 201 KAKYDSPSNVDDALAALKAKMAGQKS 226
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