Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01064 and BL01297

See DNA alignment / Visit BSNT_01064 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:34
# Commandline: needle
#    -asequence pep-align/BSNT_01064___ydjH.1.5803.seq
#    -bsequence pep-align/BL01297___ydjH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01064___ydjH-BL01297___ydjH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01064___ydjH-BL01297___ydjH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01064___ydjH
# 2: BL01297___ydjH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 260
# Identity:     132/260 (50.8%)
# Similarity:   184/260 (70.8%)
# Gaps:          11/260 ( 4.2%)
# Score: 645.0
# 
#
#=======================================

BSNT_01064___      1 MRGFLGKAIFVVLAVFIMVPLLGIEAARASESQQHVYDRAHLLSKAEIGK     50
                     ||..|..|:.:.:...:.:|:  ...|.|||.::.|||.|.||:|.||.|
BL01297___ydj      1 MRSLLRSAMILCMIFLVFIPI--ASGAAASEQKRFVYDEAGLLTKQEIEK     48

BSNT_01064___     51 LESLSAELGAKRDTNFIIITTKSTNGEDIADYTGDFYDR----YGK--GS     94
                     ||:|:|:|||:|:|:|||:||..|||.|:..|..||||.    |.|  |:
BL01297___ydj     49 LETLAAKLGAERETDFIIVTTNDTNGRDVKKYAEDFYDEKAPGYQKKHGN     98

BSNT_01064___     95 TAILTIDMTNREVFIAGFKKAEQYLDNSRLNSIRNTISSDLSNENYFEAF    144
                     .|:||:||.:|||::|||||||:||:::||:.||..|:.|:|:::|..||
BL01297___ydj     99 AAVLTVDMEHREVYLAGFKKAEEYLNDARLDKIREKITPDISDKHYEAAF    148

BSNT_01064___    145 ETYIQLSYKDMGIKPGVNPDNIFFTWWFQLIAAIAVGGIAVSIMLYHAGG    194
                     |.:::.::.||..||..  |:|||..||||:.:..:.||||:||.|::||
BL01297___ydj    149 EMFMKAAHDDMEKKPWA--DSIFFKTWFQLLVSAVIAGIAVAIMKYNSGG    196

BSNT_01064___    195 KVTVNGNTYMDQRTSDVIDQYDTYIRTTVTRERKPSDKDSGSDGGVTKGG    244
                     ||||:.:|||:..||.||...|.|||||||::||||:..| |.||.|.||
BL01297___ydj    197 KVTVSASTYMNGDTSGVIRNNDEYIRTTVTKQRKPSNNKS-SGGGTTSGG    245

BSNT_01064___    245 TSYSGSRGSF    254
                     .|:|||||||
BL01297___ydj    246 HSHSGSRGSF    255


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