Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02620 and BL01290

See DNA alignment / Visit BSNT_02620 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:18
# Commandline: needle
#    -asequence pep-align/BSNT_02620___rplS.1.5803.seq
#    -bsequence pep-align/BL01290___rplS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02620___rplS-BL01290___rplS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02620___rplS-BL01290___rplS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02620___rplS
# 2: BL01290___rplS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 115
# Identity:     111/115 (96.5%)
# Similarity:   115/115 (100.0%)
# Gaps:           0/115 ( 0.0%)
# Score: 564.0
# 
#
#=======================================

BSNT_02620___      1 MQKLIEDITKEQLRTDLPAFRPGDTLRVHVKVVEGNRERIQIFEGVVIKR     50
                     ||||||:||||||||||||||||||||||||||||||||||:||||||||
BL01290___rpl      1 MQKLIEEITKEQLRTDLPAFRPGDTLRVHVKVVEGNRERIQVFEGVVIKR     50

BSNT_02620___     51 RGGGISETFTVRKISYGVGVERTFPVHTPKIAKIEVVRYGKVRRAKLYYL    100
                     |||||||||||||||||||||||||:||||||||||||:|||||||||||
BL01290___rpl     51 RGGGISETFTVRKISYGVGVERTFPLHTPKIAKIEVVRHGKVRRAKLYYL    100

BSNT_02620___    101 RELRGKAARIKEIRR    115
                     |||||||||||||||
BL01290___rpl    101 RELRGKAARIKEIRR    115


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