Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02626 and BL01287

See DNA alignment / Visit BSNT_02626 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:19
# Commandline: needle
#    -asequence pep-align/BSNT_02626___ylqG.1.5803.seq
#    -bsequence pep-align/BL01287___ylqG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02626___ylqG-BL01287___ylqG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02626___ylqG-BL01287___ylqG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02626___ylqG
# 2: BL01287___ylqG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity:     264/579 (45.6%)
# Similarity:   380/579 (65.6%)
# Gaps:          19/579 ( 3.3%)
# Score: 1292.0
# 
#
#=======================================

BSNT_02626___      1 MNIRNDVQKALQHLFGRTAVPQETSKVNEALNGEKRLLLGKVLRLLGDQH     50
                     |.:.|||..:|:..|.:.   ....:::.....:|||:||||||.:.:|.
BL01287___ylq      1 MMMLNDVHNSLRKQFEQA---DSLQRISGTETDQKRLMLGKVLRFISEQF     47

BSNT_02626___     51 ALIQVGNQTVQGKLETQLRPQAYYWFSYEKKTAEQTGRLQVVQSFDQNPK    100
                     |.||:||...|||||..|:..|:||||||||..|.|||||||::||:|||
BL01287___ylq     48 AEIQIGNTKWQGKLEAPLKAGAHYWFSYEKKPDEATGRLQVVEAFDKNPK     97

BSNT_02626___    101 TIQDAAGKLLNAMSVKTSNAALMMTGAMLKSKTPVTENDIKTAVRWMDTL    150
                     |:||||.||||.:|:|.:..|:.:.||:||.:.|:.|||::.|::|::.|
BL01287___ylq     98 TVQDAAFKLLNGLSLKRTKEAVFLVGALLKEQQPIRENDLRAAIKWLENL    147

BSNT_02626___    151 PSQDTKKAVETVLFALKRDLPIHSEILNGVHAVKSPVPLHQHVSQLLQAI    200
                     |..|.:|..:.|:|||||:||:|..:|:.:.||||||||::.:::.|..|
BL01287___ylq    148 PKSDAQKGADAVMFALKRELPVHPGVLDSIMAVKSPVPLNEQIARTLDMI    197

BSNT_02626___    201 DQNPQQSQMMSKLKEAVTVLLNSEIDVHAERLIDKLIS-LTDNTKAPSPA    249
                     ....|.|..|.|||:|:..:|.:|.:|||||||.||.. :....|....|
BL01287___ylq    198 ANAAQPSPGMEKLKQALLPVLQAETEVHAERLIQKLAEHIRSLEKGELQA    247

BSNT_02626___    250 NTAGSRELSTPAGSPGKASLPIANHTAEQGSIQEELVKTAADIP-IKEAR    298
                     ......::.:..|.|.:        .|:.|....:..|.|...| |..|:
BL01287___ylq    248 VLPLKPQVQSEGGKPPQ--------KADAGGAYGQEAKAAQHNPQIAAAK    289

BSNT_02626___    299 QLLVKLTESAEKNSLQIVKEAANWIKAAASSGDSKSLA-ASAVLQAAQVT    347
                     .:..||...||.|...|.:|||..|||..|.|   :|. |.|||:.  .|
BL01287___ylq    290 DVFAKLAAQAETNGTHIAREAAGVIKALESRG---ALGQAPAVLEG--FT    334

BSNT_02626___    348 DQEAEVFLKAVQQTAPHLADKADVLSFLSKVKTAIGARDEVAFIKAFEQG    397
                     .:|.|:....:::|||.|.:||||||.|.|:|..:|.|||::.::|.|.|
BL01287___ylq    335 PKETELLQHIMKETAPALTNKADVLSVLLKIKDVLGVRDELSLLRAMENG    384

BSNT_02626___    398 SAVTSGEMQSIKLALSALRASHEVAEPVKQEADQLFHKLNGQLFMQQDHP    447
                     :.:....:||:||.|:.:|.:.::..||||||||:||:||||||:|.|.|
BL01287___ylq    385 AVLKEQGLQSLKLVLNEMRHASDLPAPVKQEADQIFHRLNGQLFLQNDQP    434

BSNT_02626___    448 SYSQIVMSFPMFSKSGVQDMTVLFKGKKEADGKLDPSHCRLLFLLQLDTL    497
                     :.||:.:|:|:|||:||||:.|..||:|:.|||:|||.|||:|.|||:.|
BL01287___ylq    435 AQSQLFLSYPLFSKNGVQDLNVFLKGQKKDDGKIDPSQCRLMFYLQLEAL    484

BSNT_02626___    498 KETVVDCLVQQKVMTITIETDFELQAAIDPMVPALKQGLKEMGYSLSGVN    547
                     :|||:|||:||.|||:||||.|:|::.|:|:|||||:.|||:|||||||:
BL01287___ylq    485 EETVIDCLIQQNVMTVTIETKFDLESLIEPLVPALKENLKELGYSLSGVS    534

BSNT_02626___    548 AKKRVHTEEKASIDQYITSISDQEVDVKI    576
                     ||||.:.:....::.....|::..|||||
BL01287___ylq    535 AKKRENMKLAPFLESRFEQITESAVDVKI    563


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02626 and BL01287

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
