Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02683 and BL01246

See DNA alignment / Visit BSNT_02683 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:23
# Commandline: needle
#    -asequence pep-align/BSNT_02683___sigD.1.5803.seq
#    -bsequence pep-align/BL01246___sigD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02683___sigD-BL01246___sigD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02683___sigD-BL01246___sigD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02683___sigD
# 2: BL01246___sigD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     226/254 (89.0%)
# Similarity:   246/254 (96.9%)
# Gaps:           0/254 ( 0.0%)
# Score: 1179.0
# 
#
#=======================================

BSNT_02683___      1 MQSLNYEDQVLWTRWKEWKDPKAGDDLMRRYMPLVTYHVGRISVGLPKSV     50
                     |||||||||:||:||||||||:|||||:||||||||||||||:|||||||
BL01246___sig      1 MQSLNYEDQMLWSRWKEWKDPQAGDDLIRRYMPLVTYHVGRIAVGLPKSV     50

BSNT_02683___     51 HKDDLMSLGMLGLYDALEKFDPSRDLKFDTYASFRIRGAIIDGLRKEDWL    100
                     |||||:||||||||||||||||.|||||||||||||||||||||||||||
BL01246___sig     51 HKDDLVSLGMLGLYDALEKFDPGRDLKFDTYASFRIRGAIIDGLRKEDWL    100

BSNT_02683___    101 PRTSREKTKKVEAAIEKLEQRYLRNVSPAEIAEELGMTVQDVVSTMNEGF    150
                     ||||||||||||||||||||||||||||:|||.||||:.||||:|:||||
BL01246___sig    101 PRTSREKTKKVEAAIEKLEQRYLRNVSPSEIAAELGMSEQDVVTTINEGF    150

BSNT_02683___    151 FANLLSIDEKLHDQDDGENIQVMIRDDKNVPPEEKIMKDELIAQLAEKIH    200
                     |||||||||||||.:||||:||||||||...||||::|||||:||||||:
BL01246___sig    151 FANLLSIDEKLHDHEDGENVQVMIRDDKTSTPEEKMLKDELISQLAEKIN    200

BSNT_02683___    201 ELSEKEQLVVSLFYKEELTLTEIGQVLNLSTSRISQIHSKALFKLKNLLE    250
                     |||||||||:||||||||||||||||||||||||||||||||.|||:||:
BL01246___sig    201 ELSEKEQLVISLFYKEELTLTEIGQVLNLSTSRISQIHSKALLKLKHLLD    250

BSNT_02683___    251 KVIQ    254
                     ||:|
BL01246___sig    251 KVVQ    254


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