Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02727 and BL01204

See DNA alignment / Visit BSNT_02727 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:28
# Commandline: needle
#    -asequence pep-align/BSNT_02727___spoIIIE.1.5803.seq
#    -bsequence pep-align/BL01204___spoIIIE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02727___spoIIIE-BL01204___spoIIIE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02727___spoIIIE-BL01204___spoIIIE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02727___spoIIIE
# 2: BL01204___spoIIIE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 791
# Identity:     649/791 (82.0%)
# Similarity:   709/791 (89.6%)
# Gaps:          14/791 ( 1.8%)
# Score: 3238.5
# 
#
#=======================================

BSNT_02727___      1 MAKKKRKSRKKQ---AKQLNIKYELNGLLCIAISIIAILQLGVVGQTFIY     47
                     |||:||||.|||   .|::::|:||.||:||||||||:|||||.||||||
BL01204___spo      1 MAKRKRKSTKKQKQGKKRIHLKFELYGLICIAISIIAVLQLGVAGQTFIY     50

BSNT_02727___     48 LFRFFAGEWFILCLLGLLVLGVSLFWKKKTPSLLTRRKAGLYCIIASILL     97
                     :||||||||||||||||.:.|:||||||||||.||||||||||||||:||
BL01204___spo     51 MFRFFAGEWFILCLLGLFLTGLSLFWKKKTPSFLTRRKAGLYCIIASMLL    100

BSNT_02727___     98 LSHVQLFKNLTHKGSIESASVVRNTWELFLMDMNGSSASPDLGGGMIGAL    147
                     |||||||::||.:|.::|.||::|||||||||:.|.:.||||||||||||
BL01204___spo    101 LSHVQLFQHLTERGMVQSPSVIQNTWELFLMDVKGETGSPDLGGGMIGAL    150

BSNT_02727___    148 LFATSHFLFASTGSQIMAIVMILIGMILVTGRSLQETLKKWMSPIGRFIK    197
                     |||.|:|||||.||:|:|:.:||||::|:|.|||||||.|||:|:..|:|
BL01204___spo    151 LFAASYFLFASAGSKIIAVFLILIGLLLITDRSLQETLIKWMTPVASFMK    200

BSNT_02727___    198 EQWLAFIDDMKSFKSNIQSSKKTKAPSKKQKPARKKQQMEPEPPDEEGDY    247
                     .||.||:.|:|..|:   ||.|.|: .||||..||.:  ..|.|.:|.|.
BL01204___spo    201 NQWQAFLADLKQLKN---SSPKKKS-GKKQKTQRKPK--VSEEPVQEADL    244

BSNT_02727___    248 ETVSPLIHSEPIISSFSDRNEEEESPVIEKRAEPVSKPLQDIQPETGDQE    297
                     :. .|:|.|||||||||||:|:.|....|..|.|...|   .:||.|::.
BL01204___spo    245 DP-DPVIQSEPIISSFSDRDEKPEVQAYEAPAAPAEPP---AEPEIGEEM    290

BSNT_02727___    298 TVS-APPMTFTELENKDYEMPSLDLLADPKHTGQQADKKNIYENARKLER    346
                     ..| ||.:||||||||||::||:.||.|||||||||||||||:|||||||
BL01204___spo    291 QASGAPEITFTELENKDYQLPSIQLLDDPKHTGQQADKKNIYDNARKLER    340

BSNT_02727___    347 TFQSFGVKAKVTQVHLGPAVTKYEVYPDVGVKVSKIVNLSDDLALALAAK    396
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01204___spo    341 TFQSFGVKAKVTQVHLGPAVTKYEVYPDVGVKVSKIVNLSDDLALALAAK    390

BSNT_02727___    397 DIRIEAPIPGKSAIGIEVPNAEVAMVSLKEVLESKLNDRPDAKLLIGLGR    446
                     ||||||||||||||||||||||||||||||||||||||||||||:|||||
BL01204___spo    391 DIRIEAPIPGKSAIGIEVPNAEVAMVSLKEVLESKLNDRPDAKLMIGLGR    440

BSNT_02727___    447 NISGEAVLAELNKMPHLLVAGATGSGKSVCVNGIITSILMRAKPHEVKMM    496
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01204___spo    441 NISGEAVLAELNKMPHLLVAGATGSGKSVCVNGIITSILMRAKPHEVKMM    490

BSNT_02727___    497 MIDPKMVELNVYNGIPHLLAPVVTDPKKASQALKKVVNEMERRYELFSHT    546
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01204___spo    491 MIDPKMVELNVYNGIPHLLAPVVTDPKKASQALKKVVNEMERRYELFSHT    540

BSNT_02727___    547 GTRNIEGYNDYINRANNEEGAKQPELPYIVVIVDELADLMMVASSDVEDS    596
                     ||||||||||||.|.|..|.|||||||||:||||||||||||||||||||
BL01204___spo    541 GTRNIEGYNDYIKRMNAAEEAKQPELPYIIVIVDELADLMMVASSDVEDS    590

BSNT_02727___    597 ITRLSQMARAAGIHLIIATQRPSVDVITGVIKANIPSRIAFSVSSQTDSR    646
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01204___spo    591 ITRLSQMARAAGIHLIIATQRPSVDVITGVIKANIPSRIAFSVSSQTDSR    640

BSNT_02727___    647 TILDMGGAEKLLGRGDMLFLPVGANKPVRVQGAFLSDDEVEKVVDHVITQ    696
                     |||||||||||||||||||||||||||:|||||||||:||||||||||:|
BL01204___spo    641 TILDMGGAEKLLGRGDMLFLPVGANKPLRVQGAFLSDEEVEKVVDHVISQ    690

BSNT_02727___    697 QKAQYQEEMIPEETTETHSEVTDELYDEAVELIVGMQTASVSMLQRRFRI    746
                     ||||||||||||||.||.|||||:||||||.|:|.|||||||||||||||
BL01204___spo    691 QKAQYQEEMIPEETQETVSEVTDDLYDEAVALVVSMQTASVSMLQRRFRI    740

BSNT_02727___    747 GYTRAARLIDAMEERGVVGPYEGSKPREVLLSKEKYDELSS    787
                     ||||||||||||||||:|||||||||||||||||:|:||||
BL01204___spo    741 GYTRAARLIDAMEERGIVGPYEGSKPREVLLSKEQYEELSS    781


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_02727 and BL01204

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
