Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03837 and BL01194

See DNA alignment / Visit BSNT_03837 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence pep-align/BSNT_03837.1.5803.seq
#    -bsequence pep-align/BL01194.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03837-BL01194.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03837-BL01194.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03837
# 2: BL01194
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 143
# Identity:      43/143 (30.1%)
# Similarity:    70/143 (49.0%)
# Gaps:          14/143 ( 9.8%)
# Score: 133.5
# 
#
#=======================================

BSNT_03837         1 MGAQLNSY-LMSEDARSQADFYLESLGGEIVSLKTFGEVP-----DTPED     44
                     |..:...| ||:..|:...|:|.:.|..|:...:|.||.|     :..||
BL01194            1 MKTRFTPYILMNGRAKEAIDYYRDVLDAEVKFSQTIGEGPADEAANFKED     50

BSNT_03837        45 MKEKVMHLSLKIAGNNILMLSDSFEQV---VGNRSISLALTYDNESEARE     91
                     ..:.:.|..|.| |:.:||::|...::   .||: :|:.:|..:.|.|:.
BL01194           51 ELDFIAHAVLTI-GDAVLMIADIIPELPFQSGNQ-LSICVTAADVSSAKR     98

BSNT_03837        92 AYTKLGEGGENKYPIALQPWGAYYGEVIDKFGVTWMI--TKP-    131
                     .:.||.|.||.|..:....:...||.|.|.|||.:.|  .:| 
BL01194           99 LFGKLSERGEVKLELKETYFSPAYGIVTDPFGVAFQIFAARPA    141


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.