Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01352 and BL01146

See DNA alignment / Visit BSNT_01352 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:52
# Commandline: needle
#    -asequence pep-align/BSNT_01352___sspH.1.5803.seq
#    -bsequence pep-align/BL01146___sspH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01352___sspH-BL01146___sspH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01352___sspH-BL01146___sspH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01352___sspH
# 2: BL01146___sspH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 59
# Identity:      39/59 (66.1%)
# Similarity:    45/59 (76.3%)
# Gaps:           0/59 ( 0.0%)
# Score: 189.0
# 
#
#=======================================

BSNT_01352___      1 MNIQRAKEIVESPDMKKVTYNGVPIYIQHVNEETGTARINPLDEPQEEHE     50
                     ||.|||:||||||||..|||||.|||||.|:|:..||||.||.:|:.|.|
BL01146___ssp      1 MNTQRAQEIVESPDMVDVTYNGRPIYIQRVDEQNETARIFPLGQPENEQE     50

BSNT_01352___     51 VQLNSLKED     59
                     |.|.:|||.
BL01146___ssp     51 VPLANLKEH     59


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