Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01723 and BL01106

See DNA alignment / Visit BSNT_01723 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_01723___yhgC.1.5803.seq
#    -bsequence pep-align/BL01106___yhgC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01723___yhgC-BL01106___yhgC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01723___yhgC-BL01106___yhgC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01723___yhgC
# 2: BL01106___yhgC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity:     103/167 (61.7%)
# Similarity:   137/167 (82.0%)
# Gaps:           1/167 ( 0.6%)
# Score: 582.0
# 
#
#=======================================

BSNT_01723___      1 MKVYITYGTADFLKTIVQKHPSENILLMQGQENAILIHETNGDTVFQAPH     50
                     |..||||||.||||.:.::|..||:|.|:..::|||.|||:|::||.:||
BL01106___yhg      1 MNFYITYGTVDFLKKLAKQHGLENMLFMKSHDSAILFHETDGESVFHSPH     50

BSNT_01723___     51 AYEVIDQVGEIKHPGFAVLNNIAVTQEGRPLFENRFKNRAGKVENEPGFE    100
                     .||:|||.|.::|.||.|||||.||.|||||||.||||||||:||:|||:
BL01106___yhg     51 RYEIIDQSGSLEHSGFTVLNNIPVTPEGRPLFEARFKNRAGKIENQPGFK    100

BSNT_01723___    101 AIRVLRPLDSDTYVILTLWETESAFQDWQQSGSYKEAHKKRDTSAGIDT-    149
                     |:|||||.|||||::||||:.|.:||||:.|.|:.|||:|:::||||:. 
BL01106___yhg    101 ALRVLRPKDSDTYIVLTLWDREQSFQDWKNSKSFSEAHQKKESSAGINQG    150

BSNT_01723___    150 TSIFSRPSYVTTYFAVE    166
                     .:|||||||:::|.:||
BL01106___yhg    151 GTIFSRPSYISSYHSVE    167


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.