Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02090 and BL01098
See
DNA alignment /
Visit
BSNT_02090 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:34
# Commandline: needle
# -asequence pep-align/BSNT_02090___yjmC.1.5803.seq
# -bsequence pep-align/BL01098___yjmC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02090___yjmC-BL01098___yjmC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02090___yjmC-BL01098___yjmC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02090___yjmC
# 2: BL01098___yjmC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 352
# Identity: 144/352 (40.9%)
# Similarity: 201/352 (57.1%)
# Gaps: 18/352 ( 5.1%)
# Score: 743.0
#
#
#=======================================
BSNT_02090___ 1 MKTITIAAEEAKELVRQKLAGAGLNERDAEKVADVLVHADLRNVHSHGVL 50
:.::.:|...|::|||..|||||..|..|:|||..||.|.:||||.:
BL01098___yjm 1 ---MRVSKQELFHLIKQKLIKAGLNEGAAHDVSDVLTFADHRGIHSHGAV 47
BSNT_02090___ 51 RTEHYVNRLLAGGINPGAQPVFKETGPVTGVLDGDDGFGNVNCDMAMDHA 100
|.|:|..|:..|||.......|::|||.:.|..||:|.|:.....||:.|
BL01098___yjm 48 RVEYYAERIAKGGITANPNYTFEQTGPASAVFSGDNGPGHQAAKQAMEKA 97
BSNT_02090___ 101 IDMAKKKGVGMVTAVNSSHCGALSYFVQKAADEKLIGMAMTHTDSIVVPF 150
|:|||..||.:|...|.||.|||.|||:.||::.::.::|..:|.:||||
BL01098___yjm 98 IEMAKNSGVAVVGMKNISHSGALGYFVEMAAEQDMVALSMCQSDPMVVPF 147
BSNT_02090___ 151 GGRTPFLGTNPIAYGVPAKHKKPFILDMATSKVAFGKILQAREEGKEIPE 200
||..|:.||||||:..|:..::....||||:..|:||:|.||.:.:.|||
BL01098___yjm 148 GGTEPYFGTNPIAFSAPSADERMITFDMATTVQAWGKVLDARSKNESIPE 197
BSNT_02090___ 201 GWGVDENGEAVTDPDKIVSLSTFGGPKGYGLSIVVDVFSGLLAGAAFGPH 250
.|.||..|...|:...:.:|....|||||||.::|||.||.|.|...|.|
BL01098___yjm 198 TWAVDAAGAPTTNARDVHALVPIAGPKGYGLMMMVDVLSGSLLGVPHGVH 247
BSNT_02090___ 251 IAKMYSGLDQKRKLGHYVCAINPAFFTDWDTFLEQMDAMIDELQQSPPAV 300
::.||..|.:.|.||.....||||:|||...|.:|:..|:|||:..|.|.
BL01098___yjm 248 VSSMYQDLTKGRDLGQIHIVINPAYFTDLTAFKQQISTMLDELKAQPAAE 297
BSNT_02090___ 301 GFERVYVPGEIEQLHEERNKKNGISIARSVYEFLKSR------------- 337
|:..:|.|||..:|...:..|.||.|...:|.:|.|.
BL01098___yjm 298 GYGEIYYPGERGKLRSAKYDKEGIEIVDDIYNYLVSGDVHYNRYHGKNRF 347
BSNT_02090___ 337 -- 337
BL01098___yjm 348 AE 349
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.