Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01713 and BL01068

See DNA alignment / Visit BSNT_01713 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:12
# Commandline: needle
#    -asequence pep-align/BSNT_01713___ecsA.1.5803.seq
#    -bsequence pep-align/BL01068___ecsA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01713___ecsA-BL01068___ecsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01713___ecsA-BL01068___ecsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01713___ecsA
# 2: BL01068___ecsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     215/247 (87.0%)
# Similarity:   234/247 (94.7%)
# Gaps:           1/247 ( 0.4%)
# Score: 1123.0
# 
#
#=======================================

BSNT_01713___      1 MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHII     50
                     ||||:||:|||||||||||::|||.:|..|||||||||||||||||||||
BL01068___ecs      1 MSLLTVKELTGGYTRNPVLRDVSFAIEREQIVGLIGLNGAGKSTTIRHII     50

BSNT_01713___     51 GLMDPHKGSIELNGKTFAEDPEGYRSQFTYIPETPVLYEELTLMEHLELT    100
                     |||:|||||:|||||||.:|||.||||||:|||||:|||||||.||||||
BL01068___ecs     51 GLMEPHKGSVELNGKTFMDDPESYRSQFTFIPETPILYEELTLKEHLELT    100

BSNT_01713___    101 AMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFL    150
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BL01068___ecs    101 AMAYGLSKETFEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFL    150

BSNT_01713___    151 AEPALYIIDEPFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERY    200
                     .||.||||||||||||||||||||||||||||.|::||||||||||||||
BL01068___ecs    151 VEPDLYIIDEPFLGLDPLAINALLERMNEAKKNGSAVLMSTHILATAERY    200

BSNT_01713___    201 CDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELTKEDAGHE    247
                     ||||||||||||||:|||.||||||.|::|:|||||||||||:: :|
BL01068___ecs    201 CDSFIILHNGEVRAKGTLEELREQFSMEEASLDDLYLELTKEES-YE    246


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.