Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00228 and BL01043

See DNA alignment / Visit BSNT_00228 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence pep-align/BSNT_00228___rpmC.1.5803.seq
#    -bsequence pep-align/BL01043___rpmC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00228___rpmC-BL01043___rpmC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00228___rpmC-BL01043___rpmC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00228___rpmC
# 2: BL01043___rpmC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 66
# Identity:      65/66 (98.5%)
# Similarity:    66/66 (100.0%)
# Gaps:           0/66 ( 0.0%)
# Score: 311.0
# 
#
#=======================================

BSNT_00228___      1 MKANEIRDLTTAEIEQKVKSLKEELFNLRFQLATGQLENTARIREVRKAI     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||:|
BL01043___rpm      1 MKANEIRDLTTAEIEQKVKSLKEELFNLRFQLATGQLENTARIREVRKSI     50

BSNT_00228___     51 ARMKTVIREREIAANK     66
                     ||||||||||||||||
BL01043___rpm     51 ARMKTVIREREIAANK     66


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.