Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00254 and BL01019

See DNA alignment / Visit BSNT_00254 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:57
# Commandline: needle
#    -asequence pep-align/BSNT_00254___rplM.1.5803.seq
#    -bsequence pep-align/BL01019___rplM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00254___rplM-BL01019___rplM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00254___rplM-BL01019___rplM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00254___rplM
# 2: BL01019___rplM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 145
# Identity:     141/145 (97.2%)
# Similarity:   144/145 (99.3%)
# Gaps:           0/145 ( 0.0%)
# Score: 742.0
# 
#
#=======================================

BSNT_00254___      1 MRTTPMANASTIERKWLVVDAAGKTLGRLSSEVAAILRGKHKPTYTPHVD     50
                     ||||||||||.|||||||||||||||||||:|||:|||||||||||||||
BL01019___rpl      1 MRTTPMANASNIERKWLVVDAAGKTLGRLSTEVASILRGKHKPTYTPHVD     50

BSNT_00254___     51 TGDHVIIINAEKIELTGKKLTDKIYYRHTQHPGGLKSRTALEMRTNYPEK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL01019___rpl     51 TGDHVIIINAEKIELTGKKLTDKIYYRHTQHPGGLKSRTALEMRTNYPEK    100

BSNT_00254___    101 MLELAIKGMLPKGSLGRQMFKKLNVYRGSEHPHEAQKPEVYELRG    145
                     |||||||||||||||||||||||||||||||||:|||||||||||
BL01019___rpl    101 MLELAIKGMLPKGSLGRQMFKKLNVYRGSEHPHQAQKPEVYELRG    145


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.