Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01259 and BL00958

See DNA alignment / Visit BSNT_01259 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:46
# Commandline: needle
#    -asequence pep-align/BSNT_01259___yfmP.1.5803.seq
#    -bsequence pep-align/BL00958___ymfP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01259___yfmP-BL00958___ymfP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01259___yfmP-BL00958___ymfP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01259___yfmP
# 2: BL00958___ymfP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 140
# Identity:     109/140 (77.9%)
# Similarity:   126/140 (90.0%)
# Gaps:           0/140 ( 0.0%)
# Score: 568.0
# 
#
#=======================================

BSNT_01259___      1 MEWMKIDQVAKRSGLTKRTIRFYEEIGLIPAPKRTDGGVRLYSEDDMEEL     50
                     ||||||||:|||||||||||||||||||:.:||||:||||||||||:|||
BL00958___ymf      1 MEWMKIDQMAKRSGLTKRTIRFYEEIGLLSSPKRTEGGVRLYSEDDLEEL     50

BSNT_01259___     51 EKVISTKEVLGFSLQELQHFMETSRQLELNKEGYLLSLDPKERKEKLEEI    100
                     |:|||.||||||||||||.||||.:.||:||||||||||.:|||||||:|
BL00958___ymf     51 ERVISAKEVLGFSLQELQQFMETGKHLEMNKEGYLLSLDKRERKEKLEDI    100

BSNT_01259___    101 QETLNHQLSLIDEKIRTFQSFKERLQGMKGKAERAIQSIE    140
                     |..||.|:.:|||||..|||||:||:||:.|||.|:|||:
BL00958___ymf    101 QRMLNEQMRMIDEKIEKFQSFKKRLEGMQAKAENALQSID    140


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