Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05929 and BL00926

See DNA alignment / Visit BSNT_05929 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:00
# Commandline: needle
#    -asequence pep-align/BSNT_05929___cydD.1.5803.seq
#    -bsequence pep-align/BL00926___cydD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05929___cydD-BL00926___cydD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05929___cydD-BL00926___cydD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05929___cydD
# 2: BL00926___cydD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 582
# Identity:     388/582 (66.7%)
# Similarity:   463/582 (79.6%)
# Gaps:           7/582 ( 1.2%)
# Score: 2018.0
# 
#
#=======================================

BSNT_05929___      1 MKKEE-WILPYIKQNARLFVLVIFLGGVTIFSAAFLMFTSGFLISKAATR     49
                     |..|: |||||||:|.||.::|:.|||:|..|||.||||||:||||||||
BL00926___cyd      1 MNNEDGWILPYIKKNTRLLIIVVLLGGLTACSAAALMFTSGYLISKAATR     50

BSNT_05929___     50 PENILLIYVPIVAVRTFGIARSVSRYVERLVGHHIILKIVSDMRVRLYNM     99
                     |||:|:|||||||||||||.||||||||||.||||||||:||||||||.|
BL00926___cyd     51 PENVLMIYVPIVAVRTFGILRSVSRYVERLTGHHIILKILSDMRVRLYRM    100

BSNT_05929___    100 LEPGALMLRSRFRTGDMLGILSEDIEHLQDAFLKTIFPAISALFLYAVSV    149
                     |||.||..|.|||||||||||::|:|||||.:|:|:||.:|||.||.|.:
BL00926___cyd    101 LEPQALKWRERFRTGDMLGILADDVEHLQDMYLRTVFPGLSALLLYGVFI    150

BSNT_05929___    150 IALGFFSWPFAILLALYLFVLVVLFPVVSLLVTRAKNAKLKSGRNVLYSR    199
                     .|:||||||||.|:|:|..|.|.|.|:||||||||||..||.||:.||.:
BL00926___cyd    151 AAIGFFSWPFAGLMAVYAAVFVFLVPLVSLLVTRAKNVALKRGRSHLYRQ    200

BSNT_05929___    200 LTDAVMGVSDWMFSGRRHAFIDAYEKEEHDWFELERKKQRFTRWRDFAAQ    249
                     |||||||||||:||||::.|:.:||..||:|..:|:|:.||:||||||.|
BL00926___cyd    201 LTDAVMGVSDWVFSGRQNDFVHSYEAAEHEWLAIEKKQVRFSRWRDFAMQ    250

BSNT_05929___    250 CLVAGLILLMLFWTAGQQADGELAKTMIAAFVLVVFPLTEAFLPLSDALG    299
                     ||.|||:||||.|..||.|:|.||...|||||||||||||||.|||||..
BL00926___cyd    251 CLAAGLVLLMLIWAGGQSAEGALAPVFIAAFVLVVFPLTEAFFPLSDAAA    300

BSNT_05929___    300 EVPGYQDSIRRMNKVAPQLE---ASQTESGDQMLDLQDVTLAFRDVTFSY    346
                     .:|.||||:.||:.:.|...   |...:...:.:.|.||||.|.||:|||
BL00926___cyd    301 SIPEYQDSLERMDGLQPPKRGNGADVQQERAEAVGLDDVTLRFEDVSFSY    350

BSNT_05929___    347 DNSSQVLHNFSFTLRQGEKMALLGRSGSGKSTSLALIEGALKPDSGSVTL    396
                     :....||...||.|:||||.||||.||:||||.|:||:|||.|..|::||
BL00926___cyd    351 EQGQPVLDGVSFILKQGEKTALLGPSGAGKSTILSLIQGALAPSKGNITL    400

BSNT_05929___    397 NGVETALLKDQIADAVAVLNQKPHLFDTSILNNIRLGNGEASDEDVRRAA    446
                     |.:....|:.:|:..|:|.||:||||||::||||||||.:||||||..||
BL00926___cyd    401 NDISVQSLQGEISRVVSVFNQQPHLFDTTVLNNIRLGNPDASDEDVYWAA    450

BSNT_05929___    447 KQVKLHDYIESLPDGYHTSVQETGIRFSGGERQRIALARILLQDTPIIIL    496
                     :||||||||:||||||||||||||||||||||||||||||||||.||::|
BL00926___cyd    451 RQVKLHDYIQSLPDGYHTSVQETGIRFSGGERQRIALARILLQDAPIVVL    500

BSNT_05929___    497 DEPTVGLDPITERELMETVFEVLKGKTILWITHHLAGVEAADKIVFLENG    546
                     |||||||||.||:||:.|:|:||.|||:|||||||||.||||:|:||:.|
BL00926___cyd    501 DEPTVGLDPKTEKELLSTMFQVLDGKTVLWITHHLAGAEAADRILFLDKG    550

BSNT_05929___    547 KTEMEGTHEELLAANERYSRLYHLDVPVK---    575
                     |..|.|:|::||..|.||||||.||.||.   
BL00926___cyd    551 KLAMAGSHQQLLENNPRYSRLYRLDAPVSRLF    582


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05929 and BL00926

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
