Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03102 and BL00894

See DNA alignment / Visit BSNT_03102 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:46
# Commandline: needle
#    -asequence pep-align/BSNT_03102___csaA.1.5803.seq
#    -bsequence pep-align/BL00894___csaA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03102___csaA-BL00894___csaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03102___csaA-BL00894___csaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03102___csaA
# 2: BL00894___csaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 110
# Identity:      86/110 (78.2%)
# Similarity:    95/110 (86.4%)
# Gaps:           0/110 ( 0.0%)
# Score: 439.0
# 
#
#=======================================

BSNT_03102___      1 MAVIEDFEKLDIRTGTIVKAEEFPEARVPAIKLVIDFGTEIGIKQSSAQI     50
                     ||.||||.|||||.||::||||||||:||||||.||||.|||:|.|||||
BL00894___csa      1 MATIEDFLKLDIRVGTVLKAEEFPEAKVPAIKLEIDFGGEIGVKCSSAQI     50

BSNT_03102___     51 TKRYKPEGLINKQVIAVVNFPPRRIAGFKSEVLVLGGIPGQGDVVLLQPD    100
                     ||||.||.|:.:||.||||||||||||||||||||||:|.:|||:||.||
BL00894___csa     51 TKRYTPEKLVGRQVTAVVNFPPRRIAGFKSEVLVLGGVPEKGDVILLAPD    100

BSNT_03102___    101 QPVPNGTKIG    110
                     |..||||||.
BL00894___csa    101 QEAPNGTKIS    110


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